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2.A.115.1.3
The Hypothetical Protein, HP. 6 TMSs in a 2+2+2 arrangement.

Accession Number:Q2KCS0
Protein Name:Hypothetical conserved protein
Length:210
Molecular Weight:21789.00
Species:Rhizobium etli (strain CFN 42 / ATCC 51251) [347834]
Number of TMSs:6
Substrate Unknown

Cross database links:

eggNOG: COG1284
Entrez Gene ID: 3892987   
Pfam: PF02588   
KEGG: ret:RHE_CH00548   

References (1)

[1] “The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.”  Gonzalez V.et.al.   16505379

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MASNVFTGLL NSSADRHSLF DDAQGIVAGS MLAVLGVSLL SGAGLLAGGT AGLAFLAHYA 
61:	TGFSFGLCFF AVNLPFYYLA FRRMGPAFTI KTFAAIALTS VLSEFVPGFI GIGQVDPIAG 
121:	ALFGGLVIGA GVLALFRHRA SLGGIGILAL YIQDRLGWRA GLVQLGFDCL ILALSFLVAS 
181:	PAIIACSVLG AIVFNLTLAI NHRKDRYIAV