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2.A.116.1.1
The peptidoglycolipid exporter, GAP (Sondén et al., 2005).

Accession Number:Q3L890
Protein Name:Integral membrane protein aka GAP
Length:272
Molecular Weight:29535.00
Species:Mycobacterium smegmatis [246196]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Peptidoglycolipids

Cross database links:

eggNOG: NOG46540
HEGENOM: HBG567257
RefSeq: YP_884816.1   
Entrez Gene ID: 4536676   
Pfam: PF11139   
KEGG: msm:MSMEG_0403   

References (1)

[1] “Gap, a mycobacterial specific integral membrane protein, is required for glycolipid transport to the cell surface.”  Sonden B.et.al.   16194230

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MWSDILGLAL FVSLNPLLLG FILLVLSRPR PVPNLVVFWV GCLIVNVPGF LIPLFVLRAV 
61:	PSFAEFAEDL TTADPSSGIE PFQLGTGIFA LAVSAVIALR MWVKRRANQP VLVGSGAGDR 
121:	GPTDDASTLV LDSGAREARE PGAIARMILR MRSALQRLVS RLHQEWENGA LWVALVFGLA 
181:	YIPPPPLVLL VDTIIGGSGA PIGTQIIAVF VFIMAMLAVF EITLLSYVIA PRRTQAVLEP 
241:	LHEWSHRHRQ MILLVLFGAV GIWELIVGLG VI