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2.A.119.1.3
The putative 8 TMS MmarC7_1204 protein

Accession Number:A6VIJ1
Protein Name:Permease
Length:318
Molecular Weight:34523.00
Species:Methanococcus maripaludis (strain C7 / ATCC BAA-1331) [426368]
Number of TMSs:8
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: arNOG05659
HEGENOM: HBG394653
RefSeq: YP_001330418.1   
Entrez Gene ID: 5329548   
Pfam: PF03773   
KEGG: mmz:MmarC7_1204   

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MFGWLDYVAR YVVENILNIG VDTAIGSSIH FFIYDSLKIV ILLSIMIFSI SYVRSYFPPE 
61:	KTKKILEKYS GVSGNVMASL LGIVTPFCSC SSVPLFIGFV EAGIPLGVTL SFLITSPIVN 
121:	EAAFAVLLAS FGWKIAMLYI ISGVIIGVIG GVIIGKLKME DQVEEYVYEI RSRARKIRKL 
181:	TQKERLKFAV DNTKDIVKRV WLYILIGIGI GAIIHGYAPE AILAKYAGPN NPLAVIFATI 
241:	IAVPLYSNAL GTIPIAEALI GKGVGIGTAL AFMMATTALS FPEAVLIRKV IKPKLIAAFF 
301:	GITSIAIVIT GYLFNILL