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2.A.123.1.11
The sea squirt sugar transporter, Rga or Sweet1; required for normal development (Hamada et al., 2007; Chen et al., 2010).

Accession Number:F6U696
Protein Name:Uncharacterized protein
Length:215
Molecular Weight:23595.00
Species:Ciona intestinalis (Transparent sea squirt) [7719]
Number of TMSs:7
Substrate Sugars

Cross database links:

Entrez Gene ID: 100185787   
Pfam: PF03083   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0008643 P:carbohydrate transport

References (1)

[1] “The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.”  Dehal P.et.al.   12481130

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAEFWISFFS NGCIAVTIIM FATGIPQCME MMKKKTTKNI PFLPYLITNV NAIGWIIYGK 
61:	MTVNFTVVFV NTIGAGLQTL YMAVYIFFAA DKSKPLVQSS VCGGAAAITW YIITQFANVI 
121:	DAINVTGIIC CTVTIFMFAS PLAEINTVIA NKSTATISLP LTVTASLCSA MWTMFGLVLH 
181:	DNFIIIPNVL GFFAAFSRFY LFYKYPSSPG LPHSV