TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.15.1.7
The ectoine/glycine:Na+ symporter, LcoP (Ziegler et al., 2010).

Accession Number:Q8NN75
Protein Name:Choline-glycine betaine transporter
Length:630
Molecular Weight:68320.00
Species:Corynebacterium glutamicum [1718]
Number of TMSs:12
Substrate Ectoine, Glycine, Na+

Cross database links:

HEGENOM: HBG682943
Entrez Gene ID: 1020284    3344937   
Pfam: PF02028   
KEGG: cgb:cg2563    cgl:NCgl2251   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity

References (1)

[1] “The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.”  Kalinowski J.et.al.   12948626

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSTNSGNNLP ESQESPEEPH YPHDTHPGLV PGISVDAQRN KFGLDKTVFG VTAALILAFI 
61:	AWGISSPDSV SSVSSTMFSW AMTNTGWLLN FVMLIGIGTM LYIAFSRYGR IKLGTDEDEP 
121:	EFSRFSWIAM MFGAGIGVGI FFFGPSEPLW HYLSPPPHTV EGSTPESLHQ ALAQSHFHWG 
181:	LSAWGLYALV GGALAYSSYR RGRVTLISST FRSLFGEKTE GIAGRLIDMM AIIATLFGTA 
241:	ATLGLSAIQV GQGVQIISGA SEITNNILIA IIAILTIGFI ISSVSGVSKG IRYLSNLNIS 
301:	LTLGLVLFVF ITGPTLFLLN LIPSSVLEYG SEFLSMAGKS LSWGEETIEF QAGWTAFYWA 
361:	WWIAWTPFVG MFIARISRGR TLREFALITM AIPSFILILA FTIFGGTAIT MNRENVDGFD 
421:	GSSSKEQVLF DMFSNLPLYS ITPFILIFVL AVFFVTSADS ASVVMGTMSS QGNPAPNKLI 
481:	VVFWGLCMMG IAVVMLLTGG ESALTGLQNL TILIAIPFAL VLIVMAIAFI KDLSTDPAAI 
541:	RQRYAKAAIS NAVVRGLEEH GDDFELSIEP AEEGRGAGAT FDSTADHITD WYQRTDEEGN 
601:	DVDYDFTTGK WADGWTPEST EEGEVDAKKD