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2.A.15.1.9
High affinity glycine betaine uptake system

Accession Number:Q6F754
Protein Name:Putative high affinity choline transport protein (Bet-like)
Length:660
Molecular Weight:74117.00
Species:Acinetobacter sp. (strain ADP1) [62977]
Number of TMSs:11
Substrate Glycine betaine

Cross database links:

eggNOG: COG1292
HEGENOM: HBG682943
Entrez Gene ID: 2879715   
Pfam: PF02028   
KEGG: aci:ACIAD3460   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity

References (1)

[1] “Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium.”  Barbe V.et.al.   15514110

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MPSKTSSRFA NINPNVFVST IMIIAIFLAI VILAPDAFEL LTQQLKNWIT ESFSWFYVLS 
61:	VAFFLIVLGY IACSSSGKIK LGPDHSQPDY SNSSWFAMLF TAGMGIGLMF FGIAEPIMHY 
121:	VSPPSGEPET ILAAQQSMRV TFFHWGLHAW GIYAIVALSL SYFAYRHDLP LKIRSSLYPL 
181:	IGKKIYGPMG DAVDTFATIG TIFGVATTLG FGVTQISSGL NYLFGFEPTS FSKVVLIIIV 
241:	SAMAALSVGL GLDKGVKRLA ELNLVLAVTL LAFVFFTSAT VYLLQTTIQN TGQYISNLFE 
301:	MTFNLYAYQP NGWIGGWTIM YWAWWISWSP FVGMFIARVS RGRTIREFII GVMLIPTGFT 
361:	LIWMGFMGNA GLYSILHDGN LSLLNAVQRD SSVALFEFLH SLPFSGVMSL LATVLVVLFF 
421:	VTSADSGALV VDYLTAKSED SPVWQRLFWI VVMAGLAIIL LLAGGLTALQ SATIMSALPF 
481:	TFIMLLICWG LIKALRIDST KMQAIQEART TPRAIQNPRS WQQRLGLIMH YPHSKVEVDA 
541:	YIKKHVQRAF ESLEREFKRR HLTVAISETD DGLQLKVDHH DEINFIYHVV SRETMPPSFM 
601:	LEQEHNADVE KYFQAEVFLR EGGQNYDVMD WTEEDLIQDI IDQYERHLYF LSVMRAQTGN