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2.A.17.3.14
Nitrate transporter 1.6

Accession Number:Q9LFX9
Protein Name:Nitrate transporter 1.6
Length:576
Molecular Weight:64930.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate nitrate

Cross database links:

Genevestigator: Q9LFX9
eggNOG: COG3104
HEGENOM: HOG000237399
Entrez Gene ID: 839597   
Pfam: PF00854   
KEGG: ath:AT1G27080   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0015293 F:symporter activity
GO:0042128 P:nitrate assimilation
GO:0006857 P:oligopeptide transport

References (4)

[1] “Characterization of the Arabidopsis nitrate transporter NRT1.6 reveals a role of nitrate in early embryo development.”  Almagro A.et.al.   19050168
[2] “Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.”  Theologis A.et.al.   11130712
[3] “Nitrate transporters and peptide transporters.”  Tsay Y.F.et.al.   17481610
[4] “The Arabidopsis nitrate transporter NRT1.8 functions in nitrate removal from the xylem sap and mediates cadmium tolerance.”  Li J.Y.et.al.   20501909

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV 
61:	YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL MTVTLTACLP QLHPPPCNNP 
121:	HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY 
181:	YLTLTMVLIF SHTVVVYLQT VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG 
241:	IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT 
301:	SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP 
361:	HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV TLLQRMGIGI VFAILSMFTA 
421:	GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF 
481:	PLSFAAANYL SSLLVTTVHK VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY 
541:	CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS