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2.A.2.2.2
Raffinose permease

Accession Number:P43466
Protein Name:RafP
Length:641
Molecular Weight:69914.00
Species:Pediococcus pentosaceus [1255]
Number of TMSs:13
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Raffinose

Cross database links:

Pfam: PF07690    PF00358   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005351 F:sugar:hydrogen symporter activity
GO:0016740 F:transferase activity
GO:0009401 P:phosphoenolpyruvate-dependent sugar phospho...
GO:0006814 P:sodium ion transport
GO:0055085 P:transmembrane transport

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MQEEHNYKWV GGRLIYGFGA KGNDAFYSIL SGYLIIFITS HLFDTGNKAL DNRMVSLVTL 
61:	IIMVLRIVEL FIDPFIGNAI DRTKNSPGHF RPWVVVGGTV SSIILLLLFT NLGGLYAKNA 
121:	MIYLVVFAIL YITMDIFYSF KDVGFWSMLP SLTTDSRERE KTATFARLGS TIGGGLVGVL 
181:	VMPAVIFFSA KATSTGDNRG WFIFALIICL IALISAWGVG LGTREVDSDI RKNKQDTVGV 
241:	MEIFKALAKN DQLLWAALAY LFYGVGINIL GSLEVYYFTY IMGKPKSFSI LSIINIFLGL 
301:	IATSLFPVLS KKFSRKGVFA GCLVFMLGGI AIFTIAGSNL WLVLLAATMF GFPQQMVFLV 
361:	VLMVITDSVE YGQLKLGHRD ESLALSVRPL IDKFGGAISN GVVGQIAIIS GMTTGATASS 
421:	ITAAGQLHFK LTMFAFPALM LLIAIGIFSK QIFLTEEKHA EIVAELERTW RTKFDNTTDQ 
481:	VAEKVVTSLD LATPIAGQVI PLAQVNDPTF AAGTLGDGFA IKPSDGRILA PFDATVRQVF 
541:	TTRHAVGLVG DNGIVLLIHI GLGTVKLRGT GFISYVEEGQ HVQQGDELLE FWDPTIKQAG 
601:	LDDTVIMTVT NSTEFTMMDW LVKPGQAVKA TDNILQLHTK A