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2.A.2.3.7
The putative arabinoside porter, AraT (Rodionov et al., 2010)

Accession Number:Q0HIQ0
Protein Name:Sugar (Glycoside-Pentoside-Hexuronide) transporter
Length:481
Molecular Weight:52745.00
Species:shewanella sp. (strain mr-4) [60480]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Arabinosides

Cross database links:

eggNOG: COG2211
HEGENOM: HBG518114
RefSeq: YP_734124.1   
Entrez Gene ID: 4252567   
Pfam: PF07690   
KEGG: she:Shewmr4_199   

Gene Ontology

GO:0016020 C:membrane
GO:0005215 F:transporter activity
GO:0006814 P:sodium ion transport
GO:0055085 P:transmembrane transport

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSSHKLSVIE KIGYGSGDMA VNVVISSMML IITFFYTDIF GLKPADVGIL FLLVRLIDAI 
61:	TDPLMGIIND KVTTRWGRYR PYFLFMAIPF GISVFLTFST PDWDYNAKLI WAYSTYILVT 
121:	IIFTTVTIPY ISIISVITDD PKERLSANGY RLFFAKIAAF LVTIIVPMLA SAWGGENIAA 
181:	GYQKAMGVMA LMATLLFLFC FFTTTERVAY KVETKPVGMQ LRLLFKNDQW LVLVAICVIG 
241:	TIGYVIRGSV AAYYATYYLG GDAKMLSAFL STGVGAAILA MVASTWITKR YCKLKLFRYS 
301:	QIVVGILSVI MFFAVQPGDI VLAFVLYFSI SFVVDLHAPV FWSVISESVD YGTVKTGHRV 
361:	SGLAFGGISF AQKAGMGAAG FVVGMLLTYF NYQPGETQSE FALTGISLML TVIPGAFHAL 
421:	MGLLMFKYKI SDRVYEEIKQ ALPEQAHSSQ TDANLTSKAL ASSTESSEAV TPKTAAPQVS 
481:	A