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2.A.21.3.7
Putative sialic acid uptake permease, NanP (D.A. Rodionov, pers. commun.)

Accession Number:Q5E733
Protein Name:NanP
Length:505
Molecular Weight:55564.00
Species:Vibrio fischeri (strain ATCC 700601 / ES114) [312309]
Number of TMSs:13
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Sialic acid

Cross database links:

eggNOG: COG0591
HEGENOM: HBG359501
RefSeq: YP_204051.1   
Entrez Gene ID: 3277789   
Pfam: PF00474   
BioCyc: VFIS312309:VF0668-MONOMER   
KEGG: vfi:VF_0668   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005215 F:transporter activity
GO:0006814 P:sodium ion transport
GO:0055085 P:transmembrane transport

References (1)

[1] “Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners.”  Ruby E.G.et.al.   15703294

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MEAQSFGTLN YIALFAYLGA IMAVGVYFAR RQKSADDYFK AGGRIPGWAA GFSVFATTLS 
61:	SITFMSIPAK AYTSDWTFLI GQYVAIAILP IVFWFYIPFF RKLNLTSVYE YLERRFDVRM 
121:	RLFGSISFML FHIGRIAIVT YLTALALMPF IDISPLMIVF LIGVLCIIYT FLGGIEGVIW 
181:	TDVIQGVMLS VAAILIFVVI CFNVDGGIVE VFSMSNQADK YFPAEQFSWS WTDSTIPVLM 
241:	IGFFFASLQQ FTASQDVVQR YIVTDNIDET KKALITNAKL VACVPIFFFA VGSALFAYYT 
301:	QNPELLPENF NTGGILPFYV ISQMPVGVAG LIIAAIFAAS QSSISSSLNS IAACFTSDIY 
361:	EKVSKNPTSE QKLRIGRTLT VVAGLLGVVA STYLIMSNES EIWDAFNSLL GLMGGPMTGL 
421:	FMLGIFVRRA NANSALLGVV ASIATVLWVR SATDLNFFFY GVIGTLMVVI VGYLTAPMFK 
481:	NNLNSDEIDE LSATKEKRST TAEKA