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2.A.21.4.2
Uncharacterized symporter YodF.  It is regulated by the global transcriptional regulator responding to nitrogen availablity, TnrA, suggesting the YodF transports a nitrogenous compound (Yoshida et al. 2003).

Accession Number:O34745
Protein Name:Uncharacterized symporter yodF
Length:496
Molecular Weight:53765.00
Species:Bacillus subtilis (strain 168) [224308]
Number of TMSs:13
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG0591
HEGENOM: HOG000262983
Entrez Gene ID: 940028   
Pfam: PF00474   
KEGG: bsu:BSU19580   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity
GO:0055085 P:transmembrane transport

References (3)

[1] “Sequence analysis of the Bacillus subtilis 168 chromosome region between the sspC and odhA loci (184 degrees-180 degrees).”  Ghim S.-Y.et.al.   9734814
[2] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377
[3] “Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.”  Yoshida K.et.al.   12823818

External Searches:

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  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MQGNLTALLI TAIIVLTVVC IGFLAGRDKS SRTSVEEWSV GGRRFGGLLV WFLVGADLYT 
61:	AYTFLGLTST AFTGGSVAFF AIPYSVLAYF IAYFFLPKLW KVAKIHKLTT LADYARERFN 
121:	SKLLASLVAI VGVLMLIPYI CLQLSGIQDT LQVAGTGYIN VKFVVIISFI LVALYTFFSG 
181:	IKGPTYTAII KDILVWVIML FMVVSLPLIH FNGWTPMIDT LVKEAPQMLT IPSEGPKGIP 
241:	WFITASIVSA LALFMWAHAA TGVFTAKSAD AVRKNSMFLP LYNIVLILVI FLGFIAFLVL 
301:	PEDTNPRLAL LHLIQTSYGG VAQGFAYATI ALASLIPCSI MAIGASNLFA NNLYRDLIHP 
361:	NVSQSKLTLV TRSMVFVVIG LALLFGMLFP TALVTLQLLG VSGMVQIFPA IAVSLFWKNQ 
421:	TKEATVIGLL AGLAVTFIVY ITQSAHGIYE GFWGLAANMI AVVILNPLFV KNAGSNPVIE 
481:	GLFGKKQDAN PNQKGA