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2.A.22.5.1
Hypothetical Na+-dependent permease

Accession Number:Q58715
Protein Name:YD19 aka MJ1319
Length:492
Molecular Weight:53468.00
Species:Methanococcus jannaschii [2190]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Na+

Cross database links:

HEGENOM: HBG702834
RefSeq: NP_248319.1   
Entrez Gene ID: 1452221   
Pfam: PF00209   
KEGG: mja:MJ1319   

Gene Ontology

GO:0005887 C:integral to plasma membrane
GO:0005328 F:neurotransmitter:sodium symporter activity
GO:0006836 P:neurotransmitter transport

References (1)

[1] “Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.”  Bult C.J.et.al.   8688087

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSYMERESWS SNLGFILASV GSAIGLGNIW RFGYMVYTNG GGAFLIPYIV ALLCVGIPLM 
61:	ILEFAIGHYT KKSAPLALEK LHKGSEWTGW FAVISGFIIT SYYVVIIAWC LYYLIILVIY 
121:	GYPSDPNAYF FHNILQISSG VEDIGGVSYG ILVSTLAVWG IVALILSAGI KNGLEKANKI 
181:	MIPFLLFLII LLVLNALTLP GALTGIEWYL TPDFSALFNY NVWLSAFSQI FFSLSLGFGI 
241:	LIAYASYLPK KSDLTINAVT VSLLNCGFSF LAGFAVFGTL GYMSYTSGIP LDKAVSEGIG 
301:	LAFVTFPKAL SLLPFASRLF GIVFFLALVF AGISSAVSIV EASVSAIIDK FSLSRKKALL 
361:	AVLALFIIIS PIFTTGAGLY YLDIIDHFAS GYLLPIAAIL EIIIAIWLFG GDKLREHVNK 
421:	LSEIKLGVWW KYLAGVVSPI ILTAVVFLDA SNVLTSGYGG YKTTYVIFGA LIIPLAFVVS 
481:	VILQKMKTIK GW