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2.A.23.2.3
Glutamate/aspartate/cysteine:Na+ symporter, EAAC1; EAAT3, SLC1A1 (Li+ can replace Na+; EAAC1 also mediates glutamate-independent anion conductance.) Cotransports glutamic acid with three Na+ followed by countertransport of K+(Teichman et al., 2009). The 50 residue 4B-4C loop (following TMS4) binds Na+ (Koch et al., 2007). (The dicarboxylic aminoaciduria protein in humans; NP_004161; Bröer, 2008a; 2008b). Neutralizing aspartate 83 modifies substrate translocation (Hotzy et al., 2012).  An SLC1A1 deletion segregates with schizophrenia and bipolar schizoaffective disorder in a 5-generation family (Myles-Worsley et al. 2013).  Thr101 in TMS3 is essential for Na+ binding (Tao et al. 2010).  Klotho, a 1012 aa protein with N- and C-terminal TMSs, is a regulator of the excitatory amino acid transporters EAAT3 and EAAT4 (Almilaji et al. 2013). The 3 Na+ binding sites in SLC1A porters have been identified, and both reentrant loops determine cation selectivity (Silverstein et al. 2018).  L-cysteine binds to EAAT3 in thiolate form, and EAAT3 recognizes different substrates by fine-tuning local conformations of the coordinating residues. Using purified human EAAT3, R2-hydroxyglutarate (R-2HG) binding or transport could not be observed. Imaging of EAAT3 bound to L-cysteine revealed several conformational states, including an outward-facing state with a semi-open gate and a disrupted sodium-binding site. These structures demonstrate that the full gate closure, coupled with the binding of the last sodium ion, occurs after substrate binding (Qiu and Boudker 2025). Furthermore, different substrates affect how the transporter distributes between a fully outward-facing conformation and intermediate occluded states on a path to the inward-facing conformation, suggesting that translocation rates are substrate-dependent. Two  SLC1A1-selective BIA derivatives, PBJ1 and PBJ2, with enhanced cytotoxicity, result from the inhibition of SLC1A1-dependent aspartate, glutamate, and cysteine metabolic pathways (Koochaki et al. 2025).

Accession Number:P43005
Protein Name:EAA3 aka SLC1A1 aka EAAT3 aka EAAC1
Length:524
Molecular Weight:57100.00
Species:Homo sapiens (Human) [9606]
Number of TMSs:9
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate lithium(1+), sodium(1+), potassium(1+), cysteine, glutamate(2-), aspartate(2-)

Cross database links:

RefSeq: NP_004161.4   
Entrez Gene ID: 6505   
Pfam: PF00375   
OMIM: 133550  gene
222730  phenotype
KEGG: hsa:6505    hsa:6505   

Gene Ontology

GO:0005887 C:integral to plasma membrane
GO:0005624 C:membrane fraction
GO:0017153 F:sodium:dicarboxylate symporter activity
GO:0070779 P:D-aspartate import
GO:0006835 P:dicarboxylic acid transport
GO:0051938 P:L-glutamate import
GO:0007268 P:synaptic transmission
GO:0016595 F:glutamate binding
GO:0015501 F:glutamate:sodium symporter activity
GO:0005313 F:L-glutamate transmembrane transporter activity
GO:0051260 P:protein homooligomerization

References (12)

[1] “Neuron-specific human glutamate transporter: molecular cloning, characterization and expression in human brain.”  Shashidharan P.et.al.   7859077
[2] “The neuronal and epithelial human high affinity glutamate transporter. Insights into structure and mechanism of transport.”  Kanai Y.et.al.   7914198
[3] “Functional comparisons of three glutamate transporter subtypes cloned from human motor cortex.”  Arriza J.L.et.al.   7521911
[4] “Genomic organization of the SLC1A1/EAAC1 gene and mutation screening in early-onset obsessive-compulsive disorder.”  Veenstra-VanderWeele J.et.al.   11317217
[5] “DNA sequence and analysis of human chromosome 9.”  Humphray S.J.et.al.   15164053
[6] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).”  The MGC Project Teamet.al.   15489334
[7] “Neuron-specific human glutamate transporter: molecular cloning, characterization and expression in human brain.”  Shashidharan P.et.al.   7859077
[8] “The neuronal and epithelial human high affinity glutamate transporter. Insights into structure and mechanism of transport.”  Kanai Y.et.al.   7914198
[9] “Functional comparisons of three glutamate transporter subtypes cloned from human motor cortex.”  Arriza J.L.et.al.   7521911
[10] “Genomic organization of the SLC1A1/EAAC1 gene and mutation screening in early-onset obsessive-compulsive disorder.”  Veenstra-VanderWeele J.et.al.   11317217
[11] “DNA sequence and analysis of human chromosome 9.”  Humphray S.J.et.al.   15164053
[12] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).”  The MGC Project Teamet.al.   15489334
Structure:
6S3Q     

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FASTA formatted sequence
1:	MGKPARKGCE WKRFLKNNWV LLSTVAAVVL GITTGVLVRE HSNLSTLEKF YFAFPGEILM 
61:	RMLKLIILPL IISSMITGVA ALDSNVSGKI GLRAVVYYFC TTLIAVILGI VLVVSIKPGV 
121:	TQKVGEIART GSTPEVSTVD AMLDLIRNMF PENLVQACFQ QYKTKREEVK PPSDPEMNMT 
181:	EESFTAVMTT AISKNKTKEY KIVGMYSDGI NVLGLIVFCL VFGLVIGKMG EKGQILVDFF 
241:	NALSDATMKI VQIIMCYMPL GILFLIAGKI IEVEDWEIFR KLGLYMATVL TGLAIHSIVI 
301:	LPLIYFIVVR KNPFRFAMGM AQALLTALMI SSSSATLPVT FRCAEENNQV DKRITRFVLP 
361:	VGATINMDGT ALYEAVAAVF IAQLNDLDLG IGQIITISIT ATSASIGAAG VPQAGLVTMV 
421:	IVLSAVGLPA EDVTLIIAVD WLLDRFRTMV NVLGDAFGTG IVEKLSKKEL EQMDVSSEVN 
481:	IVNPFALEST ILDNEDSDTK KSYVNGGFAV DKSDTISFTQ TSQF