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2.A.25.1.3
Alanine:Na+ symporter, AgcS (Moore and Leigh, 2005)

Accession Number:Q6LX42
Protein Name:AgcS aka Sodium:alanine symporter
Length:453
Molecular Weight:47526.00
Species:Methanococcus maripaludis [39152]
Number of TMSs:11
Location1 / Topology2 / Orientation3: Cell outer membrane1
Substrate Alanine, Na+

Cross database links:

HEGENOM: HBG671706
RefSeq: NP_988631.1   
Entrez Gene ID: 2761075   
Pfam: PF01235   
BioCyc: MMAR267377:MMP1511-MONOMER   
KEGG: mmp:MMP1511   

Gene Ontology

GO:0016020 C:membrane
GO:0005283 F:sodium:amino acid symporter activity
GO:0006814 P:sodium ion transport

References (1)

[1] “Complete genome sequence of the genetically tractable hydrogenotrophic methanogen Methanococcus maripaludis.”  Hendrickson E.L.et.al.   15466049

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MDFVSLVNTV NSFVWGPYML VLLLGTGIFL TLRLGFMQIH TLPYALKLAF SKHQDETSEG 
61:	DISHFQALMT ALAATIGTGN IAGVATAYVL GGPGAIFWMW VTAFFGMATK YAEAVLAIKY 
121:	RTVDDNGEMA GGPMYFLEKG LPDHGLGKIL GVAFAFFGAF AAFGIGNMVQ TNSVADAVAS 
181:	NFGVDPLITG FVLAIFTAAV ILGGIKSIGK ATGIIVPFMA VFYILAGLVI LAMNIGYIIP 
241:	AFGTIFSSAF NFSAGFGALI GTAIMWGVKR GVFSNEAGLG SAPIAAAAAK TDHPGRQALV 
301:	SMTGTFLDTI VVCTITGLVL TIAGLKAFPG LTDLTGASLT AASFDALMPM GGLIVTIGLV 
361:	FFAYSTVLGW SYYGEKCFEY LIGTKGIRLY RIAFVLVAFW GATASLPLVW NIADTLNGAM 
421:	AIPNLIGLLL LSGVVVSETK AFNEIRKNEA KNA