TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.28.3.4
Putative Na+-dependent transporter, YfeH (332 aas; 7-10 TMSs)

Accession Number:P39836
Protein Name:Uncharacterized protein yfeH
Length:332
Molecular Weight:36406.00
Species:Escherichia coli (strain K12) [83333]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Na+

Cross database links:

Genevestigator: P39836
EchoBASE: EB2279
EcoGene: EG12376
eggNOG: COG0385
HEGENOM: HBG291857
RefSeq: AP_003003.1    NP_416905.1   
Entrez Gene ID: 946874   
BioCyc: EcoCyc:EG12376-MONOMER    ECOL168927:B2410-MONOMER   
KEGG: ecj:JW5876    eco:b2410   

References (4)

[1] “Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features.”  Yamamoto Y.et.al.   9205837
[2] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[3] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[4] “Intrinsic and extrinsic approaches for detecting genes in a bacterial genome.”  Borodovsky M.et.al.   7984428

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKLFRILDPF TLTLITVVLL ASFFPARGDF VPFFENLTTA AIALLFFMHG AKLSREAIIA 
61:	GGGHWRLHLW VMCSTFVLFP ILGVLFAWWK PVNVDPMLYS GFLYLCILPA TVQSAIAFTS 
121:	MAGGNVAAAV CSASASSLLG IFLSPLLVGL VMNVHGAGGS LEQVGKIMLQ LLLPFVLGHL 
181:	SRPWIGDWVS RNKKWIAKTD QTSILLVVYT AFSEAVVNGI WHKVGWGSLL FIVVVSCVLL 
241:	AIVIVVNVFM ARRLSFNKAD EITIVFCGSK KSLANGIPMA NILFPTSVIG MMVLPLMIFH 
301:	QIQLMVCAVL ARRYKRQTEQ LQAQQESSAD KA