TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameOrganismal TypeExample
2.A.4.1.1









Cd2+, Zn2+, Co2+ efflux permease (also binds Cu2+ and Ni2+) (Anton et al., 2004)
Bacteria
CzcD of Ralstonia metallidurans (previously Alcaligenes eutrophus)
2.A.4.1.2









Zn2+, Co2+ efflux permease
Bacteria
ZntA of Staphylococcus aureus
2.A.4.1.3









Cd2+ or Zn2+:H+ + K+ antiporter, CzcD
Bacteria
CzcD of Bacillus subtilis
2.A.4.1.4









Zn2+ (Km=105 μM), Cd2+ (Km=90 μM):proton (Km=20 nM) antiport metal ion efflux permease, ZitB (Chao and Fu, 2004a); Zn2+ (Km=1.4 μM; Anton et al., 2004). It also takes up Ni2+ and Cu2+ (Rahman et al., 2008).

Bacteria

ZitB of E. coli (P75757)
2.A.4.1.5









The major Zn2+ resistance determinant, ZitA (Grover and Sharma, 2006Grover and Sharma, 2006)

Bacteria

ZitA of Mycobacterium smegmatis (A0QQH3)
2.A.4.1.6









Mitochondrial metal transporter 2
Fungi
MMT2 of Saccharomyces cerevisiae
2.A.4.2.1









Mitochondrial Co2+/Zn2+ uptake (into mitochondria) permease.  A single mutation (N45I) increases the specificity for Fe2+ and decreases it for Co2+ (Lin et al., 2008).

Yeast

Cotl of Saccharomyces cerevisiae
2.A.4.2.2









Vacuolar Zn2+, Cd2+ uptake (into vacuoles) permease (Zn2+/Cd2+:H+ antiporter). A single mutation (N44I) changes the specificity from Zn2+ to Fe2+ (Lin et al., 2008). Lin et al. (2009) have identified transmembrane residues that determine metal specificity.

Yeast

Zrclp (ZnrP) of Saccharomyces cerevisiae
2.A.4.2.3









Plasma membrane Zn2+ efflux permease
Animals
ZnT1 of Rattus norvegicus
2.A.4.2.4









Zn2+ exporter, CDF-1

Animals

CDF-1 of Caenorhabditis elegans (Q95QW4)
2.A.4.2.5









solute carrier family 30, member 10
Animals
SLC30A10 of Homo sapiens
2.A.4.2.6









Zinc transporter 1 (ZnT-1) (Solute carrier family 30 member 1)
Animals
SLC30A1 of Homo sapiens
2.A.4.3.1









Vesicular Zn2+ uptake (into endosomal/lysosomal vesicles) permease, ZnT2. There are two isoforms due to alternative splicing, 35 kDa (plasma membrane localized) and 42 kDa (endosome/secretory compartment localized) (Lopez and Kelleher, 2009).

Animals
ZnT2 of Rattus norvegicus
2.A.4.3.2









Vesicular Zn2+ uptake (into synaptic vesicles) permease, ZnT3 (SLC30A subfamily). ZnT-3 regulates presynaptic Erk1/2 signaling and hippocampus-dependent memory (Sindreu et al., 2011).

Animals
SLC30A3 of Homo sapiens
2.A.4.3.3









Mammary epithelia/brain Zn2+ transporter ZnT4 (the cause of inherited zinc deficiency in the lethal milk (lm) syndrome of mice, due to a nonsense mutation at codon 297 (arg) in the ZnT4 gene) (Huang and Gitschier, 1997).
Animals
ZnT4 of Mus musculus
(O35149)
2.A.4.3.4









Plant root and leaf vacuolar Zn2+ transporter, ZAT-1 or MTP1 (metal tolerance protein 1) (Desbrosses-Fonrouge et al., 2005). Loss of the histidine-rich loop stimulates transport activity (Kawachi et al., 2008). The barley orthologue has broader metal specificity (Podar et al., 2012). Critical residues for function, ion selectivity and structure have been identified (Kawachi et al., 2012).

Plants

MTP1 of Arabidopsis thaliana
(Q9ZT63)
2.A.4.3.5









Homodimeric solute carrier family 30 (zinc transporter), member 8, ZnT8.  An inherited R325W mutant gives aberant zinc transport in pancreatic beta cells (Weijers 2010).

Animals

SLC30A8 of Homo sapiens
2.A.4.3.6









solute carrier family 30 (zinc transporter), member 2
Animals
SLC30A2 of Homo sapiens
2.A.4.3.7









Zinc transporter 4 (ZnT-4) (Solute carrier family 30 member 4)
Animals
SLC30A4 of Homo sapiens
2.A.4.4.1









Heteromeric nuclear/ER Zn2+ uptake permease, Msc2/Zrg17 (Ellis et al., 2005)
Yeast
Msc2/Zrg17 heteromeric Zn2+ transporter of Saccharomyces cerevisiae
Msc2 (Q03455)
Zrg17 (P53735)
2.A.4.4.2









Zn2 Transporter, LbrM31

Euglenoza

LbrM31 of Leishmania braziliensis (A4HJM3)
2.A.4.4.3









Golgi/secretory granule Zn2 uptake (into Golgi or granules) permease, ZnT5 or ZTL1 (ZnT5 forms heterooligomers with ZnT6) (Ellis et al., 2005; Ishihara et al., 2006) (Variant B catalyzes bidirectional transport (Valentine et al., 2007) )

Animals
SLC30A5 of Homo sapiens
2.A.4.4.4









Golgi/secretory granule Zn2+ uptake (into Golgi or granules) permease, ZnT6 (ZnT6 forms heterooligomers with ZnT5) (Ellis et al., 2005; Ishihara et al., 2006)
Animals
SLC30A6 of Homo sapiens
2.A.4.4.5









Golgi/secretory granule Zn2+ uptake (into Golgi or granules) permease, ZnT7 (Ishihara et al., 2006)
Animals
SLC30A7 of Homo sapiens
2.A.4.4.6









Metal tolerance protein C2 (AtMTPc2) (AtMTP5)
Plants
MTPC2 of Arabidopsis thaliana
2.A.4.5.1









Golgi/endomembrane Mn2+-specific CDF transporter (394 aas) (Peiter et al., 2007)
Plants
MTP11.1 of Populus trichocarpa (A4ZUV2)
2.A.4.6.1









CDF transporter, ZnT9 of unknown specificity (568 aas) (Montanini et al., 2007)
Animals
SLC30A9 of Homo sapiens
2.A.4.7.1









Zn2+/Cd2+/Hg2+/Fe2+:H+ antiporter, YiiP or FieF (Chao and Fu, 2004b; Grass et al., 2005; Wei et al., 2004; Wei and Fu, 2006). The structure (3.8 Å resolution) reveals a homodimer interconnected at the cytoplasmic domain through four Zn2+ ions. A 6 TMS bundle features of a tetrahedral Zn2+ binding site (Lu and Fu, 2007). 

Bacteria

YiiP of E. coli (P69380)
2.A.4.7.2









Metal tolerance protein C1 (AtMTPc1) (AtMTP6)
Plants
MTPC1 of Arabidopsis thaliana
2.A.4.7.3









Putative magnetosome membrane iron transporter, MamB.  Forms a stable complex with MamM which stabilizes MamB.  MamB also interacts with other proteins including the PDZ1 domain of MamE (Q6NE61).  Both MamB and MamM are essential for magnetite biomineralization and are involved in several steps in magnetosome formation, but only MamB is essential for formation of magnetosome membrane vesicles (Uebe et al. 2011).  Implicated in iron uptake due to homology with other CDF transporters.

Bacteria

MamB of Magnetospirillum gryphiswaldense
2.A.4.7.4









Putative magnetosome membrane iron transporter, MamM.  Forms a stable complex with MamB which it stabilizes.  MamB also interacts with other proteins including the PDZ1 domain of MamE (Q6NE61; see 2.A.4.7.3).  Both MamB and MamM are essential for magnetite biomineralization and are involved in several steps in magnetosome formation, but only MamB is essential for formation of magnetosome membrane vesicles (Uebe et al. 2011).  Implicated in iron uptake due to homology with other CDF transporters.

Bacteria

MamM of Magnetospirillum gryphiswaldense
2.A.4.7.5









Cd2+/Zn2+ efflux pump, YiiP or FieF. A low resolution structure in the open configuration has been determined by cryoelectron microscopy (Coudray et al. 2013).

Proteobacteria

YiiP of Shewanella oneidensis (Q8E919)
2.A.4.8.1









CDF Family homologue with MMT1 domain

Actinobacteria

CDF porter of Streptomyces coelicolor
2.A.4.8.2









CDF Family member

Actinobacteria

CDF cation efflux carrier of Mycobacterium tuberculosis