TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.68.1.1
p-Aminobenzoyl-glutamate uptake permease, AbgT (YdaH) (Carter et al., 2007).

Accession Number:P46133
Protein Name:AbgT aka YdaH aka B1336
Length:508
Molecular Weight:54886.00
Species:Escherichia coli [83333]
Number of TMSs:13
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate p-Aminobenzoyl-glutamate

Cross database links:

Genevestigator: P46133
EchoBASE: EB2697
EcoGene: EG12853
eggNOG: COG2978
HEGENOM: HBG683698
DIP: DIP-9031N
RefSeq: AP_001964.1    NP_415852.2   
Entrez Gene ID: 945912   
Pfam: PF03806   
BioCyc: EcoCyc:ABGT-MONOMER    ECOL168927:B1336-MONOMER   
KEGG: ecj:JW5822    eco:b1336   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0006865 P:amino acid transport

References (7)

[1] “Characterization of mutations that allow p-aminobenzoyl-glutamate utilization by Escherichia coli.”  Hussein M.J.et.al.   9829935
[2] “A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map.”  Aiba H.et.al.   9097039
[3] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[4] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[5] “Characterisation and nucleotide sequence of ogt, the O6-alkylguanine-DNA-alkyltransferase gene of E. coli.”  Potter P.M.et.al.   2825131
[6] “Detection of new genes in a bacterial genome using Markov models for three gene classes.”  Borodovsky M.et.al.   7567469
[7] “Global topology analysis of the Escherichia coli inner membrane proteome.”  Daley D.O.et.al.   15919996

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSMSSIPSSS QSGKLYGWVE RIGNKVPHPF LLFIYLIIVL MVTTAILSAF GVSAKNPTDG 
61:	TPVVVKNLLS VEGLHWFLPN VIKNFSGFAP LGAILALVLG AGLAERVGLL PALMVKMASH 
121:	VNARYASYMV LFIAFFSHIS SDAALVIMPP MGALIFLAVG RHPVAGLLAA IAGVGCGFTA 
181:	NLLIVTTDVL LSGISTEAAA AFNPQMHVSV IDNWYFMASS VVVLTIVGGL ITDKIIEPRL 
241:	GQWQGNSDEK LQTLTESQRF GLRIAGVVSL LFIAAIALMV IPQNGILRDP INHTVMPSPF 
301:	IKGIVPLIIL FFFVVSLAYG IATRTIRRQA DLPHLMIEPM KEMAGFIVMV FPLAQFVAMF 
361:	NWSNMGKFIA VGLTDILESS GLSGIPAFVG LALLSSFLCM FIASGSAIWS ILAPIFVPMF 
421:	MLLGFHPAFA QILFRIADSS VLPLAPVSPF VPLFLGFLQR YKPDAKLGTY YSLVLPYPLI 
481:	FLVVWLLMLL AWYLVGLPIG PGIYPRLS