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3.A.1.106.4
The duplicated ABC transporter, CgR_1214 (1247 aas; MC(poorly conserved) MC(well conserved))

Accession Number:A4QD95
Protein Name:CgR_1214
Length:1247
Molecular Weight:135578.00
Species:Corynebacterium glutamicum (strain R) [340322]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG1132
HEGENOM: HBG429047
RefSeq: YP_001138094.1   
Entrez Gene ID: 4994097   
Pfam: PF00664    PF00005   
KEGG: cgt:cgR_1214   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005524 F:ATP binding
GO:0042626 F:ATPase activity, coupled to transmembrane m...
GO:0055085 P:transmembrane transport

References (1)

[1] “Comparative analysis of the Corynebacterium glutamicum group and complete genome sequence of strain R.”  Yukawa H.et.al.   17379713

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKTEQSQKAQ LAPKKAPEKP QRIRQLISVA WQRPWLTSFT VISALAATLF ELTLPLLTGG 
61:	AIDIALGNAG DTLTTDLLDR FTPSGVSVLT SVIALIVLLA LLRYASQFGR RYTAGKLSMG 
121:	VQHDVRLKTM RSLQNLDGPG QDSIRTGQVV SRSISDINMV QSLVAMLPML IGNVVKLVLT 
181:	LVIMLAISPP LTIIAAVLVP LLLWAVAYSR KALFASTWSA QQKAADLTTH VEETVTGIRV 
241:	VKAFAQEDRE TDKLDLTARE LFAQRMRTAR LTAKFIPMVE QLPQLALVVN IVGGGYLAMT 
301:	GHITVGTFVA FSSYLTSLSA VARSLSGMLM RVQLALSSVE RIFEVIDLQP EHTDPAHPLS 
361:	LPDTPLGLSF NNVDFRGILN GFELGVQAGE TVVLVGPPGS GKTMAVQLAG NFYQPDGGHI 
421:	AFDSNGHRTR FDDLTHSDIR KNLIAVFDEP FLYSSSIREN ISMGLDVSDE QIEHAARLAQ 
481:	AHDFIDRLPN RYEEVIGERG LTLSGGQRQR IALARAFLAH PKVLVLDDAT SAIDASTEDR 
541:	IFQALREELH DVTILIIAHR HSTLELGDRV GLVEDGRVTA LGPLSEMRDH ARFSHLMALD 
601:	FQDSHDPEFT LDNGSLPSQE QLWPEVSTEK QYKILAPAPG RGRGMSMPAT PELLAQIEAL 
661:	PAATEETRVD AERLRTSTSG FKLLSLFKQV RWLIAAVVAL LLVGVAADLA FPTLMRAAID 
721:	NGVQAQSAST LWWIAIAGSV VVLLSWAAAA INTIITARTG ERLLYGLRLR SFVHLLRLSM 
781:	SYFERTMSGR IMTRMTTDID NLSSFLQTGL AQTVVSVGTL IGVVTMLAIT DAQLALVALS 
841:	VVPIIIVLTL IFRRISSRLY TASREQASQV NAVFHESIAG LRTAQMHRME DQVFDNYAGE 
901:	AEEFRRLRVK SQTAIAIYFP GLGALSEIAQ ALVLGFGALQ VMRGDISTGV LVAFVLYMGL 
961:	MFGPIQQLSQ IFDSYQQAAV GFRRITELLA TQPSVPDLGT NRHARQAATQ PLLLDDVTFG 
1021:	YSDDPILENV TVQIEPGTTV AVVGPTGAGK STVVKLLSRL YDPNEGAVKA GEIDIKDFPT 
1081:	ADWRRTIGTV PQEAHLFSGS IADNIGYGCR EASTSKIEAA ARRVGALNAI AAIPDGFNHQ 
1141:	VGERGRNLSS GQRQLIALAR AELIEPSIML LDEATSTLDP ATEAVILNAS DRVTKGRTSI 
1201:	IVAHRLATAK RADRILVVEQ GRIIEDGSHD ALLSANGTYA RMWHLMA