TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.106.9
SoxR regulon single protein ABC exporter, Sco7008, containing an N-terminal membrane domain and a C-terminal ATPase domain (Shin et al. 2011). SoxR responds to extracellular redox-active compounds.  Thus, it is induced in stationary phase during the production of the benzochromanequinone blue-pigmented antibiotic, actinorhodin (Naseer et al. 2014). Possibly an actinorhodin exporter.

Accession Number:Q9KZE5
Protein Name:Putative ABC-transport protein
Length:624
Molecular Weight:67273.00
Species:Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) [100226]
Number of TMSs:6
Substrate Actinorhodin

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	METTAWTQLY SVMNAKDERR PFARATMRRI GAFARPHRRR IVRFVLLGVA TALLAVATPV 
61:	LAGKVVDAIV SDGDEGTVVR LALLIALIAV AEAVLGIFSR RLSATLGEGL ILDLRTAVFD 
121:	HVQRMPVAFF TRTRTGALVS RLNNDVIGAQ RAFSNTLSGV VSNVVTLLLT LAVMLTLSWQ 
181:	ITLLALVLLP VFVLPARRMG RRMARMQREA AALNAAMGTR MTERFSAPGA TLIKLFGRPE 
241:	EESAEFADRA RRVADIGVRT ATAQAAFITA LTLVSALALA LVYGLGGFFA LRGTLDAGAV 
301:	VALALLLTRL YAPLTALAGA RVEVMSALVS FERVFEVLDL APLIDEKPDA RPVPDGPVAV 
361:	EFDDVRFGYP SADKVSLASL EEVATLDTRG GEEVLHGLSF RAEPGQTIAL VGSSGAGKST 
421:	IAQLLPRLYD TDGGTVRVGG VDVRELSARS LRDTVGMVTQ DGHLFHDTVR ANLLLARPDA 
481:	TEDDLWEALR RARLADLVRS LPDGLDTVVG ERGYRLSGGE RQRMTIARLL LARQRVVILD 
541:	EATAHLDNTS EAAVQEALTE ALQGRTAVVI AHRLSTVRAA DRILVVEAGR IVESGTHEEL 
601:	LAVDGRYAQL HRTQFERPAL DKAA