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3.A.1.145.4
Putative ABC2 protein of 537 aas and 14 putative TMSs

Accession Number:D1YY51
Protein Name:Putative uncharacterized protein
Length:537
Molecular Weight:58338.00
Species:Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) [304371]
Number of TMSs:14
Substrate Unknown

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSAARAFYYT IKADFLERVR SYSFLVVLLL TMLAAYVFVP GPDAGYMTLK LSSTDGFYRG 
61:	IYNSAWVGAM VSLPTTLFLA LFGYFVVKNA VGRDRRTGVG QIIATTPISK PVYMLGKATS 
121:	NFAVLAVIVG VMMAGALAMQ LLPGETSAID LWALWSPFIF LSLPAMAVIA SVAVLFESIW 
181:	LLRGGFGNVV YFILYILVLV VLLTSASGIK WGDDLAFAKD MLGTSVGISS IEATAKIIYP 
241:	AFEPGHWSMG FAPIDHPPHT FMWNGIPWTP LILLGRLFWV LVACGIAVMA SLFFDRFDSA 
301:	GNVNAKTGKQ TSRPEPLAIE KPAVDARLTP LSSDKKSLNV LALFMAELKL AFKGQKWWWY 
361:	AGAAIVILAG LVSSGSEERH FAMLAAMVWP VLIWSSMGTR ERTFNMAQIV FSAPGPIKNQ 
421:	LPVMWLSGVC VGIVICSGVF VSMALSGSFG EMATLFTEML LIPAMALAMG IWSGSSKLFE 
481:	ALYMILWYVG PVNGLPFLDL TGTIVSSMHI GLPAAYLAVT VVFMALMVMG RYRQTFA