TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.154.4
Uncharacterized protein of 12 TMSs in a 1 + 5 + 1 +5 arrangement.  TMSs 5 and 6 as well as 11 and 12 are separated by about 30 - 50 residues.

Accession Number:SIM59375.1
Protein Name:SIM59375.1 integral membrane protein [Mycobacteroides abscessus subsp. abscessus]
Length:772
Molecular Weight:
Species:Mycobacteroides abscessus subsp. abscessus [1185650]
Number of TMSs:12
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MAARLSTGTL KRQAGRILRF SIVLPLFMTV MFPLIYGFSM HAPTPHHLKV AVVAQDASAE 
61:	HLVDRLDAAA GDSYDVSAVD SAEEAKRQIE ALQVRAAWDP QTNTEYVASM GSTSATQFAE 
121:	SYIAKIAPKV LVELGKAESA EQAPAPTVQD LVPPPGGDGL GLSLLFMGLP VMMAGFMTAT 
181:	GLRSNLAQLS ARVAISIMAV LALAYATLAT FVGYSVYAAF QVHALPIFLL MAFASFIVML 
241:	FHTGGMRVIG LYMALPTIFL LVLLGVPSSG AGMATELVPP VVAALHPWLP TPALLDALRK 
301:	LLYFPTASLA GNVITLLLWF FLALALLGAS FLRRPRPTDA DAVPAEKDEQ EAVADTPGTR 
361:	AEGRAREQLR AAVASTRGFR GFFGSRRVVS DEQMQNRRGL HAAIRLPMFF AIAMPLMYLG 
421:	LVHHPAPNGM VLDVVADGAQ GTSIAKTLEQ LPAYEVHRVD SAEQARQDML HGRARGAFVP 
481:	AADAAEVPGA EAGKGPVVLV ASGTGIQAES AVTTVFAAVS GEVSPQTVDL APTHANDRFG 
541:	MSMMYLGLGG IVGSNIAGMM IGLVGRGWSW YRRLAWVLGV AAANTGLQYL ISVHVVRFLP 
601:	ADVDWTVWPI LFLMSVSIQI FAVGGALLIR NDVMIWLIGV FIMCGVPASG LLLPLDMAPD 
661:	RYQILHHLVP SAVALGAIRS RVYLPEAPVG SAVLTELIWL AAALLVYLWG CLHVRRLRRR 
721:	DEAAAAREAH QFDDAEAGEF EGAVLSGSPG PQTRQLQVVR AAAKEAARSR S