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3.A.1.207.6
ABC3-type exporter.  The membrane component (M) has 1157 aas and 10 TMSs in a 1 + 3 + 2 + 1 + 3 TMS arrangement. An ATPase gene does not occur adjacent to or near the M protein.

Accession Number:CDW87038
Protein Name:CDW87038.1 family protein [Stylonychia lemnae]
Length:1158
Molecular Weight:
Species:Stylonychia lemnae [5949]
Number of TMSs:10
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDINQTLDPS TVCILNIQHK IIQIKSEISD ASALHPHVNA KYKNIYSYSE DTSTFINPDT 
61:	SIKPEMLMDS TYEPRRVPLN SKNEQIRLSK MKCWPTTKLF CRYQWRDIKR HKFHFCLAFC 
121:	SVFTIVLATL VVISIIGKGP IIFLKMAESN HGAIDAYILP GSDERVNDLH QSMFLNFTAL 
181:	QDLVGEEKYS YTPRKTYCGT QMMKFEQESV QNHEQIKLKK SPQNENIVDN KGESFLGEQI 
241:	ETVQNAKDEF TIPSRKDVYQ FGENLMEKRT ERQIFNLKAD DKQQTVCINV INSNREHKID 
301:	IGDKFDLPDL NYGECYISDF QKDLLNVDIG DSVYLWAYIG NMYDLLIDEY NSVAPFYNWP 
361:	IAYKSSSYSL TQLPCKIVGF FSSSNGKFAE GNIQNQVIME YDYFLPYIAQ YLPWELYYYS 
421:	EFKEFLTRPD LVSLNYYADY IALNLPSPRH DWYSSDNIDS IQYYVTKHVN SFIQDVGFYP 
481:	VNAQLPILSE MEKLNLAILL FNLIFRVVIA IFVMISIVLV YSLLMIGIDG KTLEMGILRM 
541:	VGASKVGLTL MILLQSLMFV LPAILFGFVL SIPCLALCYT KVFQEELNNG FSPIPNVAAF 
601:	INAFVLGLLI PILSSIMPVV RVLGQNLNDA LNYERNRVSA LYVKILNKSR TDMLPPLIFG 
661:	IITFCYGFAI YYLLPLSMLS LDLGLTLEVF FFILIGLLLG IAILAINIQK PCEVILTYIF 
721:	LCFETRAMRK MVLNNLKAHM MRNRLTSTIF SLALGFIIFL LVAYKLQVQY MLNQRESRSG 
781:	VFPSLVTDYP YYVNPTYIDP VLQDNMDKIE SFNWITFEFI RTKPQTQISG VEIAGSDRLT 
841:	VFQAMPYGVT PNIFSVSRES FKQIYYDRSK LTIGEQLYTA RGSQGGVLST YQVRTLNCDP 
901:	KYPDQKGKMY MYISQENRNH TRYYQVVPTT VMSSAPFFGM TDMEQNYRYP YLMSIPMFMT 
961:	LSDQQSVNEV AYERLGIKLK DDYQSNNDQV LMLNKIKEAL PDYIKNKIDF RSQGQATLVL 
1021:	VDNIVSLLFD IVIVITMFLC FFSLSSSMSA NLYEQAKEIG ILRAIGFKKI RIIMLYVYEA 
1081:	FILVFASSIM GIFIGIVVGW SMTLQFAVVQ EMPIEFYFPW FELIIIMLAS WFCAFFSVFG 
1141:	PTRSIIKHRI ASILKMN