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3.A.3.2.29
The putative Ca+ ATPase with an extra C-terminal TMS followed by a lysin (LysM) domain of ~210aas. LysM domains are often found in cell wall degradative enzymes and have peptidoglycan binding sites. Found in Nitrosococcus oceani as well as Nitrosococcus halophilus. The ATPase domain is 46% identical to 3.A.3.2.4.

Accession Number:D5C355
Protein Name:ATPase, P-type (Transporting), HAD superfamily, subfamily IC
Length:1087
Molecular Weight:119163.00
Species:Nitrosococcus halophilus (strain Nc4) [472759]
Number of TMSs:10
Substrate Ca2+

Cross database links:

Entrez Gene ID: 8916814    8916833   
Pfam: PF00689    PF00690    PF00122    PF00702    PF01476   
KEGG: nhl:Nhal_1826    nhl:Nhal_1845   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005524 F:ATP binding
GO:0015662 F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0046872 F:metal ion binding
GO:0006754 P:ATP biosynthetic process
GO:0006812 P:cation transport
GO:0016998 P:cell wall macromolecule catabolic process

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKSVKQESGH AHTVEAVLQR IGSDRLGLTQ SEAEQRLQQY GPNRLTPPKR RGPIERFLVQ 
61:	FHNVLIYVLL AAAVVTALLA HWVDTGVILG VVVLNALIGF IQEGKAEQAL EALRHLLSPQ 
121:	ASVLRDGRHR MIPAEQLVPG DVVTLQSGDK VPADLRLIRV KNLRIEEAAL TGESMPVEKA 
181:	LEPVAENASL GDRTNMAYSG TLVTYGTAEG VVVATGDHTE IGRISAMLGQ VQTLTTPLLR 
241:	QMAVFGRWLT AVILGVAAAV FAFGVGVRGY SFHEMFLAAV GLAVAAIPEG LPAIMTITLA 
301:	MGVQRMARRN AIIRRLPAVE TLGSVNVICS DKTGTLTRNE MTVRTVITAD AGFEISGVGY 
361:	NPHGGFSQQG QIILMDDYPG LGELCRAGLL CNDAILHNVE ATWVIQGDPT EAALVSLAMK 
421:	ANLLPEWERE EWQRVDVIPF ESEHRFMATL HHDRVGHAFI YLKGAPEQVL EMCHHQRSRG 
481:	EDEPLDLPYW HDRILEMASR GERVLAVAFR VTHTDHCNLR FEDVQEGLTL LGLFGIIDPP 
541:	REEAIAAVKE CQEAGIRVKM ITGDHLLTAQ AISRQLGLKH SDQALAGTKL EVMDDETLRN 
601:	VILDVDVFAR ASPEHKLRLV KALQSQGRVV AMTGDGVNDA PALKRADVGI AMGQKGTEVA 
661:	KEAAEAVLAD DNFASIAQAV KEGRTVYDNL KKAILFILPT NGGEAMALVA AILLGYMLPI 
721:	TPVQILWINM VTAVTLALAL AFEPPEGNVM RRPPREPGEP VLSGFLVWRI VFVSVILVVG 
781:	TFGLFLWYRE QGAPIEYART IAVNTLVMFE IFYLLNTRYM TNSVLSREGL LGNRYVLIAI 
841:	AVVVGLQLLF TYTGPMQQLF ASVALGLHDW GWIVLVTSSV FVLVELEKSF LRRRKEKAPP 
901:	RRVEPPVAAF ERFKPRRVWP AALILLLLGV GVGSWIWVQF EGEEKEAIVV AEAERQARPP 
961:	AEPLPDTQTP GVKTPSDRET TPAPQQPEVA AIPLPEKEKE VPERPEMVPK PPIKEVEEEP 
1021:	EQIEVSPAAK TVTVQPGDTL SQIAARAYGD PTQWPLIYEA NRGKIENPNV IIPGMELTLP 
1081:	PAPKNQD