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3.A.3.6.17
Cd2+-selective export ATPase, HMA3 (expressed in root cell tonoplasts wherein Cd2+ is sequestered (Ueno et al., 2010)).

Accession Number:Q8H384
Protein Name:Cadmium selective transporter for low entry to shoot 1 from Nipponbare
Length:1004
Molecular Weight:102664.00
Species:Oryza sativa subsp. japonica (Rice) [39947]
Number of TMSs:8
Substrate Cd2+

Cross database links:

HEGENOM: HBG507745 HBG507745
Entrez Gene ID: 4342783   
Pfam: PF00122    PF00403    PF00702   
KEGG: osa:4342783   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005524 F:ATP binding
GO:0015662 F:ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
GO:0046872 F:metal ion binding
GO:0046873 F:metal ion transmembrane transporter activity
GO:0006754 P:ATP biosynthetic process

References (2)

[1] “Gene limiting cadmium accumulation in rice.”  Ueno D.et.al.   20823253
[2] “The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information.”  Ohyanagi H.et.al.   16381971

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MAGKDEAEGL EARLLLLPPE AAAEEPTRCG GGDGGGGGRK RKKTYLDVLG VCCSAEVALV 
61:	ERLLAPLDGV RVVSVVVASR TVVVEHDPAA APESAIVKAL NKAGLEASVR AYGSSGVVSR 
121:	WPSPYIVASG VLLTASFFEW LFPPLQCLAV AAVVAGAPPM VRRGFAAASR LSLDINVLML 
181:	IAVAGALCLG DYTEAGAIVF LFTTAEWLET LACTKASAGM SSLMGMLPVK AVIATTGEVV 
241:	SVRDVRVGDV VAVRAGEIVP VDGVVVDGQS EVDERSLTGE SFPVPKQPHS EVWAGTMNFD 
301:	GYIAVRTTAL AENSTVAKME RLVEAAQNSR SKTQRLIDSC AKYYTPAVVV VAAGVALIPA 
361:	LLGADGLEQW WKLALVMLVS ACPCALVLST PVASFCAMLR AARMGIFIKG GDVLESLGEI 
421:	RAVAFDKTGT ITRGEFSIDS FHLVGDHKVE MDHLLYWIAS IESKSSHPMA AALVEYAQSK 
481:	SIQPNPENVG DFRIYPGEGI YGEIHGKHIY IGNRRTLARA SSPQSTQEMG EMIKGVSIGY 
541:	VICDGELAGV FSLSDDCRTG AAEAIRELGS LGIKSVMLTG DSSAAATHAQ GQLGGVMEEL 
601:	HSELLPEDKV RLVSGLKARF GPTMMVGDGM NDAAALAAAD VGVSMGISGS AAAMETSHAT 
661:	LMSSDVLRVP EAVRLGRCAR RTIAVNVAGS VAVKAAVLAL AAAWRPVLWA AVLADVGTCL 
721:	LVVLNSMTLL REEWKGGAKE DGACRATARS LVMRSQLAAD SQAPNAADAG AAGREQTNGC 
781:	RCCPKPGMSP EHSVVIDIRA DGERQEERPA EAAVVAKCCG GGGGEGIRCG ASKKPTATVV 
841:	VAKCCGGGGG GEGTRCGASK NPATAAVVAK CCSGGGGEGI GCGASKKPTA TAVVAKCCGG 
901:	GGEGTRCAAS KKPATAAVVA KCCGGDGGEG TGCGASKRSP PAEGSCSGGE GGTNGVGRCC 
961:	TSVKRPTCCD MGAAEVSDSS PETAKDCRNG RCCAKTMNSG EVKG