8.A.5 The Voltage-gated K+ Channel β-subunit (Kvβ) Family
Many β-subunits of voltage-gated K+
channels (VIC superfamily, TC #1.A.1.2.1-3) have been sequenced and functionally characterized. The one from rat has been crystallized, and a 2.1 Å resolution structure is available (Gulbis, 2000). The mammalian β-subunits are 350-410 residues in length. They exhibit extensive sequence similarity with many ubiquitous oxidoreductases, with bacterial stress response proteins and with plant auxin-induced proteins. These β-subunits are to some extent interchangeable, and a variety of alternative splice variants are found. They regulate various aspects of the voltage-gated mammalian channels as well as the Drosophila Shaker K+ channel. Thus they affect the voltage-dependence of the activation process, the rate of deactivation and both N-type and C-type inactivation. The conserved C-terminal domain of the β-subunit interacts with the conserved N-terminal hydrophilic domain of the Shaker α-subunit, the same region that determines the compatibility of α-subunits. The hyperkinetic gene of Drosophila encodes a β-subunit of 546 amino acyl residues that when defective produces the Shaker-like, ether-sensitive leg shaking. Regulatory
References associated with 8.A.5 family:
Gulbis, J.M., M. Zhou, S. Mann, and R. MacKinnon. (2000). Structure of the cytoplasmic β subunit-T1 assembly of voltage-dependent K+ channels. Science 289: 123-127.
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Jan, L.Y. and Y.N. Jan. (1997). Cloned potassium channels from eukaryotes and prokaryotes. Annu. Rev. Neurosci. 20: 91-123. 9056709
Mangubat, E.Z., T.-T. Tseng, and E. Jakobsson. (2003). Phylogenetic analyses of potassium channel auxiliary subunits. J. Mol. Microbiol. Biotechnol. (in press). 12867745
