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9.A.14.1.12
Rhodopsin of 359 aas and 7 TMSs, Rho or Zfo2.  Light activated retinal release has been studied (Morrow and Chang 2015).

Accession Number:P35359
Protein Name:Rhodopsin
Length:354
Molecular Weight:39706.00
Species:Danio rerio (Zebrafish) [7955]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MNGTEGPAFY VPMSNATGVV RSPYEYPQYY LVAPWAYGLL AAYMFFLIIT GFPVNFLTLY 
61:	VTIEHKKLRT PLNYILLNLA IADLFMVFGG FTTTMYTSLH GYFVFGRLGC NLEGFFATLG 
121:	GEMGLWSLVV LAIERWMVVC KPVSNFRFGE NHAIMGVAFT WVMACSCAVP PLVGWSRYIP 
181:	EGMQCSCGVD YYTRTPGVNN ESFVIYMFIV HFFIPLIVIF FCYGRLVCTV KEAAAQQQES 
241:	ETTQRAEREV TRMVIIMVIA FLICWLPYAG VAWYIFTHQG SEFGPVFMTL PAFFAKTSAV 
301:	YNPCIYICMN KQFRHCMITT LCCGKNPFEE EEGASTTASK TEASSVSSSS VSPA