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3.A.1.1.29
Aldouronate transporter, LplA,B,C (Chow et al., 2007)

Accession Number:A9QDR6
Protein Name:LplA aka UgpB
Length:570
Molecular Weight:63252.00
Species:Paenibacillus sp. JDR-2 [324057]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Aldouronate

Cross database links:

RefSeq: YP_003010082.1   
Entrez Gene ID: 8125044   
KEGG: pjd:Pjdr2_1320   

References (1)

[1] “Structure, function, and regulation of the aldouronate utilization gene cluster from Paenibacillus sp. strain JDR-2.”  Chow V.et.al.   17921311

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence 
1:	MVNKKLLTVS LAAAMLAVTA SACGGNNDNS NANSGKSGNS GNAASNSASP EADDKTPVTF 
61:	SYYSFTSQKD ALASDTVIGK ELQQQTGVDW KMEFLVGDPQ TKSGVMIASG DYPDVIVPEG 
121:	EIDKLLDAGA FIPLDDLIEK YGPNIKRVYG PYFDKFRQAD GKMYFLPFGA NQGYIGDPGI 
181:	SQGAFWIQRS VLKEAGYPKI KTLDQYFDLI KQYQEKHPQV DGKDTIGFAS LAGPADSFFS 
241:	ITNPSMHLAG YPNDGDVIVD MNTHEAKTYA ATDIEKKWLQ KLNEVNAEGL FDPETFTANK 
301:	DQFLAKLTSG RVLGYFNYAW QVGDATNNLK KAGIDEKRYA PLPIVFDENT KDQYVDPPSF 
361:	VNNRGIGISV KAKDAVRIIK YFDNLLKEEN QVLVQWGVKD QNYTVDANGR YVMDAQQIAD 
421:	RNDPEKKRTV GWQYFEYSWP RYGNNSVLAD GNSYGVGNQP EVAYAGYTDG DKALLDAYGV 
481:	KTFSEYFSKP DDRSWYPAWS INKGQGTPEQ IFQQKAGDLQ KKFVPKLVLA KPSEFDSIWS 
541:	DYTGQMGKLD VKGYETFVTK VVQDRIAGKW