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3.A.1.1.29
Aldouronate transporter, LplA,B,C (Chow et al., 2007)

Accession Number:A9QDR8
Protein Name:YtcP aka UgpE
Length:306
Molecular Weight:33965.00
Species:Paenibacillus sp. JDR-2 [324057]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Aldouronate

Cross database links:

RefSeq: YP_003010084.1   
Entrez Gene ID: 8125046   
Pfam: PF00528   
KEGG: pjd:Pjdr2_1322   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (1)

[1] “Structure, function, and regulation of the aldouronate utilization gene cluster from Paenibacillus sp. strain JDR-2.”  Chow V.et.al.   17921311

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence 
1:	MKESSAKARY SSLPDKIFDT SNIVFMLLVV TVTLYPFLNM FALSFNDAND SIRGGIYAWP 
61:	RMWTWDNYSY IFNEASIYHA TLISALRTIA GTITSVFCTA MLAYTISRQE FVLRKFVTLV 
121:	AIFTMYFSGG LIPGYLLIKE LHMINSFWVY IIPGIIGVFN MIVIRSFIEG LPDGIMESAK 
181:	IDGAGEFITF MRIVLPLTVP ALATVSLFVA VSQWNSWFDV FLYNSSHLNL STLQYELMKI 
241:	LQTSNTAASS TNAGDQFAAG QSGVTAVTPT SIRATMTIVA SLPIILVYPF LQKYFVKGMT 
301:	VGGVKG