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3.A.7.12.1
The Cag pathogenicity island (PAI) proteins (Kutter et al., 2008).  CagD (Cag24) is essential for CagA translocation and maximal induction of interleukin-8 secretion (Cendron et al., 2009). It is required for a pro-inflammatory response and multiple cytoskeletal and gene regulatory effects in gastric epithelial cells. Its molecular properties are described in a review by Fischer (2011). Cag16 (CagM) (of unknown function and not dermonstrably homologous to proteins of type IV secretion systems in other bacteria) has 3-4 TMSs and is essential for CagA export. It may therefore be a core protein of the Cag complex (Ling et al. 2013).

Accession Number:O25262
Protein Name:Cag7
Length:1927
Molecular Weight:219401.00
Species:Helicobacter pylori (Campylobacter pylori) [210]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate

Cross database links:

DIP: DIP-3092N
RefSeq: NP_207323.1   
Entrez Gene ID: 899268   
Pfam: PF07337    PF03743   
KEGG: hpy:HP0527   

References (1)

[1] “The complete genome sequence of the gastric pathogen Helicobacter pylori.”  Tomb J.-F.et.al.   9252185
Structure:
6ODI     

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Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MNEENDKLET SKKAQQDSPQ DLSNEEATEA NHFENLLKES KESSDHHLDN PTETQTHFDG 
61:	DKSEETQTQM DSEGNETSES SNGSLADKLF KKARKLVDNK KPFTQQKNLD EETQELNEED 
121:	DQENNEYQEE TQTDLIDDET SKKTQQHSPQ DLSNEEATEA NHFENLLKES KESSDHHLDN 
181:	PTETQTNFDG DKSEETQTQM DSEGNETSES SNGSLADKLF KKARKLVDNK KPFTQQKNLD 
241:	EETQELNEED DQENNEYQEE TQTDLIDDET SKKTQQHSPQ DLSNEEATEA NHFENLLKES 
301:	KESSDHHLDN PTETQTNFDG DKSEEITDDS NDQEIIKGSK KKYIIGGIVV AVLIVIILFS 
361:	RSIFHYFMPL EDKSSRFSKD RNLYVNDEIQ IRQEYNRLLK ERNEKGNMID KNLFFNDDPN 
421:	RTLYNYLNIA EIEDKNPLRA FYECISNGGN YEECLKLIKD KKLQDQMKKT LEAYNDCIKN 
481:	AKTEEERIKC LDLIKDENLK KSLLNQQKVQ VALDCLKNAK TDEERNECLK LINDPEIREK 
541:	FRKELELQKE LQEYKDCIKN AKTEAEKNKC LKGLSKEAIE RLKQQALDCL KNAKTDEERN 
601:	ECLKNIPQDL QKELLADMSV KAYKDCVSKA RNEKEKQECE KLLTPEARKK LEQQVLDCLK 
661:	NAKTDEERKK CLKDLPKDLQ SDILAKESLK AYKDCVSQAK TEAEKKECEK LLTPEAKKLL 
721:	EEEAKESVKA YLDCVSQAKT EAEKKECEKL LTPEAKKKLE EAKKSVKAYL DCVSRARNEK 
781:	EKKECEKLLT PEAKKLLEQQ ALDCLKNAKT DKERKKCLKD LPKDLQKKVL AKESVKAYLD 
841:	CVSQAKTEAE KKECEKLLTP EARKLLEEAK KSVKAYLDCV SQAKTEAEKK ECEKLLTPEA 
901:	RKLLEEXAKE SVKAYLDCVS QAKNEAEKKE CEKLLTLESK KKLEEAKKSV KAYLDCVSQA 
961:	KTEAEKKECE KLLTPEAKKL LEQQALDCLK NAKTEADKKR CVKDLPKDLQ KKVLAKESLK 
1021:	AYKDCVSKAR NEKEKKECEK LLTPEAKKLL EEAKKSVKAY LDCVSQAKTE AEKKECEKLL 
1081:	TPEARKLLEE AKESVKAYKD CVSKARNEKE KKECEKLLTP EAKKLLEQQV LDCLKNAKTE 
1141:	ADKKRCVKDL PKDLQKKVLA KESVKAYLDC VSRARNEKEK KECEKLLTPE AKKLLEEAKE 
1201:	SLKAYKDCLS QARNEEERRA CEKLLTPEAR KLLEQEVKKS IKAYLDCVSR ARNEKEKKEC 
1261:	EKLLTPEARK FLAKQVLNCL EKAGNEEERK ACLKNLPKDL QENILAKESL KAYKDCLSQA 
1321:	RNEEERRACE KLLTPEARKL LEQEVKKSVK AYLDCVSRAR NEKEKKECEK LLTPEARKFL 
1381:	AKELQQKDKA IKDCLKNADP NDRAAIMKCL DGLSDEEKLK YLQEAREKAV ADCLAMAKTD 
1441:	EEKRKCQNLY SDLIQEIQNK RTQNKQNQLS KTERLHQASE CLDNLDDPTD QEAIEQCLEG 
1501:	LSDSERALIL GIKRQADEVD LIYSDLRNRK TFDNMAAKGY PLLPMDFKNG GDIATINATN 
1561:	VDADKIASDN PIYASIEPDI AKQYETEKTI KDKNLEAKLA KALGGNKKDD DKEKSKKSTA 
1621:	EAKAENNKID KDVAETAKNI SEIALKNKKE KSGEFVDENG NPIDDKKKAE KQDETSPVKQ 
1681:	AFIGKSDPTF VLAQYTPIEI TLTSKVDATL TGIVSGVVAK DVWNMNGTMI LLDKGTKVYG 
1741:	NYQSVKGGTP IMTRLMIVFT KAITPDGVII PLANAQAAGM LGEAGVDGYV NNHFMKRIGF 
1801:	AVIASVVNSF LQTAPIIALD KLIGLGKGRS ERTPEFNYAL GQAINGSMQS SAQMSNQILG 
1861:	QLMNIPPSFY KNEGDSIKIL TMDDIDFSGV YDVKITNKSV VDEIIKQSTK TLSREHEEIT 
1921:	TSPKGGN