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3.D.1.4.2
[Ni2+-4Fe-4S] H+ translocating, quinone-independent ferredoxin:H+ oxidoreductase, EchA-F (Hedderich and Forzi, 2005; Künkel et al., 1998; Welte and Deppenmeier 2013) The Ech hydrogenases of M. mazei and M. barkeri have been characterized and were shown to pump protons (Welte et al., 2010).  The EchC and EcnF subunits include [Fe4S4] centers, and that in the EchC subunit exhibits a pH dependency to suggest that it plays a role in proton pumping (Forzi et al. 2005).  EchE has the NiFe center that converts 2H+ to H2.  The transmembrane subuits are EchA and EchB (Welte and Deppenmeier 2013) The Ech hydrogenases of M. mazei and M. barkeri have been characterized and were shown to pump protons (Welte et al., 2010).  The EchC and EcnF subunits include [Fe4S4] centers, and that in the EchC subunit exhibits a pH dependency to suggest that it plays a role in proton pumping (Forzi et al. 2005).  EchE has the NiFe center that converts 2H+ to H2.  The transmembrane subuits are EchA and EchB (Welte and Deppenmeier 2013).

Accession Number:O59652
Protein Name:EchA
Length:639
Molecular Weight:68696.00
Species:Methanosarcina barkeri [2208]
Number of TMSs:19
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate hydron

Cross database links:

Pfam: PF00361    PF00662   
BioCyc: MetaCyc:MONOMER-12657   

Gene Ontology

GO:0008137 F:NADH dehydrogenase (ubiquinone) activity
GO:0042773 P:ATP synthesis coupled electron transport

References (1)

[1] “An Escherichia coli hydrogenase-3-type hydrogenase in methanogenic archaea.”  Kunkel A.et.al.   9546662

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MIENTVMLLI IVPLLFSLLF VALPKSLYRY LAWAFFIIGV ALSVSLVLGG TGVVPVEGPN 
61:	FAMYENIVLL LEVLVILYIL AVSAKYKNWP TLGLGIISAA LFAYTYANVP GAEGASFNID 
121:	PLAQLMILIV NIVGTAIILF ATGYMDQYEE HRHLNRQKIF YFTMSFFLAA MNGLVMSDTL 
181:	GWLYLFWELT TLCSFVLISY NMDEEGINNG FRALSLNLVG GVAMSIGIIL LATNYNISSL 
241:	TGIATYAGTD AVALAALALP VALLCIGGFA KSAQMPFHSW LLGAMVAPTP VSALLHSSTM 
301:	VNAGVFLVVK LVPAYANTSL GTAIAVYGSF TFVICSALAL SQRNAKRVLA YSTIANLGLI 
361:	IASAGIGTPL AVAASMMLIL FHAISKGLLF LCTGEIEHTI GSRDIEDMSG LIKKAPLLTS 
421:	IAALGMVSML LPPFGVLLTK WVSMEAASNN PVVIIFIVLG SALTTVYYSK WLGTILSTSM 
481:	DKNAVPHKKL ETYFPLSVLG LSIIGTSIFI FSIYDYFIRP QVEILLKVAP AVTGQAGQFT 
541:	SEIGAFAYAA IFAVLALAIL IYLATKNMFT PRTAGYYMCG ENNLEKDRLM FRNGLCSYEK 
601:	CSVSNIYLQN IFGESKLTTF GYAISIILIV IALAGGVGL