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3.A.20.1.1
The peroxisomal importing translocon with receptors: Pex5p and Pex7p; and receptor facilitator: Pex4p. Peroxisomal biogenesis factor PEX26 is a membrane anchor for the multi-subunit PEX1-PEX6 protein complex that controls ubiquitination and dislocation of PEX5 cargo receptors for peroxisomal matrix protein import. PEX26 associates with the peroxisomal translocation pore via PEX14 (Guder et al. 2018). Luminal peroxisomal proteins are imported from the cytosol by mobile receptors, which then recycle back to the cytosol by a poorly understood process (Feng et al. 2022). Recycling requires receptor modification by a membrane-embedded ubiquitin ligase complex comprising three RING finger domain-containing proteins (Pex2, Pex10 and Pex12). Feng et al. 2022 reported a cryo-EM structure of the ligase complex, which together with biochemical and in vivo experiments reveals its function as a retrotranslocation channel for peroxisomal import receptors. Each subunit of the complex contributes five transmembrane segments that co-assemble into an open channel. The three ring finger domains form a cytosolic tower, with ring finger 2 (RF2) positioned above the channel pore. The N terminus of a recycling receptor is inserted from the peroxisomal lumen into the pore and monoubiquitylated by RF2 to enable extraction into the cytosol. If recycling is compromised, receptors are polyubiquitylated by the concerted action of RF10 and RF12 and degraded. This polyubiquitylation pathway also maintains the homeostasis of other peroxisomal import factors. Thus, a crucial step during peroxisomal protein import is clarified, and it explains why mutations in the ligase complex cause human disease (Feng et al. 2022).

Accession Number:O75381
Protein Name:Peroxisomal membrane protein PEX14
Length:377
Molecular Weight:41237.00
Species:Homo sapiens (Human) [9606]
Location1 / Topology2 / Orientation3: Peroxisome membrane1 / Peripheral membrane protein2 / Cytoplasmic side3
Substrate protein polypeptide chain

Cross database links:

RefSeq: NP_004556.1   
Entrez Gene ID: 5195   
Pfam: PF04695   
OMIM: 214100  phenotype
601791  gene+phenotype
KEGG: hsa:5195   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005634 C:nucleus
GO:0005778 C:peroxisomal membrane
GO:0043234 C:protein complex
GO:0047485 F:protein N-terminus binding
GO:0003714 F:transcription corepressor activity
GO:0032582 P:negative regulation of gene-specific transc...
GO:0043433 P:negative regulation of transcription factor...
GO:0051260 P:protein homooligomerization
GO:0016558 P:protein import into peroxisome matrix
GO:0055085 P:transmembrane transport

References (11)

[1] “Identification of a human PTS1 receptor docking protein directly required for peroxisomal protein import.”  Fransen M.et.al.   9653144
[2] “The peroxin Pex14p. cDNA cloning by functional complementation on a Chinese hamster ovary cell mutant, characterization, and functional analysis.”  Shimizu N.et.al.   10212238
[3] “Complete sequencing and characterization of 21,243 full-length human cDNAs.”  Ota T.et.al.   14702039
[4] “The DNA sequence and biological annotation of human chromosome 1.”  Gregory S.G.et.al.   16710414
[5] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).”  The MGC Project Teamet.al.   15489334
[6] “PEX19 binds multiple peroxisomal membrane proteins, is predominantly cytoplasmic, and is required for peroxisome membrane synthesis.”  Sacksteder K.A.et.al.   10704444
[7] “Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.”  Olsen J.V.et.al.   17081983
[8] “Identification of a new complementation group of the peroxisome biogenesis disorders and PEX14 as the mutated gene.”  Shimozawa N.et.al.   15146459
[9] “Lys-N and trypsin cover complementary parts of the phosphoproteome in a refined SCX-based approach.”  Gauci S.et.al.   19413330
[10] “Lysine acetylation targets protein complexes and co-regulates major cellular functions.”  Choudhary C.et.al.   19608861
[11] “Structural basis for competitive interactions of Pex14 with the import receptors Pex5 and Pex19.”  Neufeld C.et.al.   19197237
Structure:
2W84   2W85   4BXU     

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MASSEQAEQP SQPSSTPGSE NVLPREPLIA TAVKFLQNSR VRQSPLATRR AFLKKKGLTD 
61:	EEIDMAFQQS GTAADEPSSL GPATQVVPVQ PPHLISQPYS PAGSRWRDYG ALAIIMAGIA 
121:	FGFHQLYKKY LLPLILGGRE DRKQLERMEA GLSELSGSVA QTVTQLQTTL ASVQELLIQQ 
181:	QQKIQELAHE LAAAKATTST NWILESQNIN ELKSEINSLK GLLLNRRQFP PSPSAPKIPS 
241:	WQIPVKSPSP SSPAAVNHHS SSDISPVSNE STSSSPGKEG HSPEGSTVTY HLLGPQEEGE 
301:	GVVDVKGQVR MEVQGEEEKR EDKEDEEDEE DDDVSHVDEE DCLGVQREDR RGGDGQINEQ 
361:	VEKLRRPEGA SNESERD