TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.2.1.1
H+-translocating F-type ATPase. The loop-regions in subunits a and c that are implicated in H+ transport likely interact in a single structural domain which then functions in gating H+ release to the cytoplasm (Steed et al. 2014). Three different states that relate to rotation of the enzyme have been observed, with the central stalk's epsilon subunit in an extended autoinhibitory conformation in all three states (Sobti et al. 2016). The Fo motor consists of seven transmembrane helices and a decameric c-ring, and invaginations on either side of the membrane indicate the entry and exit channels for protons. The proton translocating subunit contains near parallel helices inclined by ~30 degrees to the membrane, a feature corresponding to rotary ATPases. This rotary ATPase subtype, the peripheral stalk, is resolved over the entire length of the complex, revealing the F1 attachment points and a coiled-coil that bifurcates toward the membrane with its helices separating to embrace subunit a from two sides (Sobti et al. 2016). Reversible beta/epsilon (stator/rotor) interactions may block rotation and thereby inhibit catalysis (Bulygin et al. 2004). Current views on unidirectional catalysis by the F1·Fo ATP synthase/ATPase have been reviewed (Zharova et al. 2023). Hypermucoviscosity is a hallmark of hypervirulent Klebsiella pneumoniae, and OmpR regulates its energy status, via the F-type ATPase of this organism; this influences hypermucoviscosity (Wang et al. 2023).

Accession Number:P0A6E6
Protein Name:ATP synthase epsilon chain ATPE aka ATPC aka UNCC aka PAPG aka B3731
Length:139
Molecular Weight:15068.00
Species:Escherichia coli [83333]
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Peripheral membrane protein2
Substrate hydron

Cross database links:

DIP: DIP-47828N
RefSeq: AP_004056.1    NP_418187.1   
Entrez Gene ID: 948245   
Pfam: PF00401    PF02823   
BioCyc: EcoCyc:ATPC-MONOMER    ECOL168927:B3731-MONOMER    MetaCyc:ATPC-MONOMER   
KEGG: ecj:JW3709    eco:b3731   

Gene Ontology

GO:0005886 C:plasma membrane
GO:0045261 C:proton-transporting ATP synthase complex, c...
GO:0005524 F:ATP binding
GO:0046933 F:hydrogen ion transporting ATP synthase acti...
GO:0046961 F:proton-transporting ATPase activity, rotati...
GO:0042777 P:plasma membrane ATP synthesis coupled proto...

References (12)

[1] “DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.”  Walker J.E.et.al.   6395859
[2] “Nucleotide sequence of the genes for beta and epsilon subunits of proton-translocating ATPase from Escherichia coli.”  Kanazawa H.et.al.   6285901
[3] “Structure and function of H+-ATPase: what we have learned from Escherichia coli H+-ATPase.”  Kanazawa H.et.al.   6301339
[4] “The atp operon: nucleotide sequence of the genes for the gamma, beta, and epsilon subunits of Escherichia coli ATP synthase.”  Saraste M.et.al.   6272217
[5] “DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication.”  Burland V.D.et.al.   7686882
[6] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[7] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[8] “Small genes/gene-products in Escherichia coli K-12.”  Wasinger V.C.et.al.   9868784
[9] “Protein complexes of the Escherichia coli cell envelope.”  Stenberg F.et.al.   16079137
[10] “Structural features of the epsilon subunit of the Escherichia coli ATP synthase determined by NMR spectroscopy.”  Wilkens S.et.al.   7583669
[11] “Solution structure of the epsilon subunit of the F1-ATPase from Escherichia coli and interactions of this subunit with beta subunits in the complex.”  Wilkens S.et.al.   9756905
[12] “Crystal structure of the epsilon subunit of the proton-translocating ATP synthase from Escherichia coli.”  Uhlin U.et.al.   9331422
Structure:
1AQT   1BSH   1BSN   1FS0   1QO1   3OAA   5T4O   5T4P   5T4Q   6OQR   [...more]

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MAMTYHLDVV SAEQQMFSGL VEKIQVTGSE GELGIYPGHA PLLTAIKPGM IRIVKQHGHE 
61:	EFIYLSGGIL EVQPGNVTVL ADTAIRGQDL DEARAMEAKR KAEEHISSSH GDVDYAQASA 
121:	ELAKAIAQLR VIELTKKAM