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3.A.2.1.1
H+-translocating F-type ATPase. The loop-regions in subunits a and c that are implicated in H+ transport likely interact in a single structural domain which then functions in gating H+ release to the cytoplasm (Steed et al. 2014). Three different states that relate to rotation of the enzyme have been observed, with the central stalk's epsilon subunit in an extended autoinhibitory conformation in all three states (Sobti et al. 2016). The Fo motor consists of seven transmembrane helices and a decameric c-ring, and invaginations on either side of the membrane indicate the entry and exit channels for protons. The proton translocating subunit contains near parallel helices inclined by ~30 degrees to the membrane, a feature corresponding to rotary ATPases. This rotary ATPase subtype, the peripheral stalk, is resolved over the entire length of the complex, revealing the F1 attachment points and a coiled-coil that bifurcates toward the membrane with its helices separating to embrace subunit a from two sides (Sobti et al. 2016). Reversible beta/epsilon (stator/rotor) interactions may block rotation and thereby inhibit catalysis (Bulygin et al. 2004). Current views on unidirectional catalysis by the F1·Fo ATP synthase/ATPase have been reviewed (Zharova et al. 2023). Hypermucoviscosity is a hallmark of hypervirulent Klebsiella pneumoniae, and OmpR regulates its energy status, via the F-type ATPase of this organism; this influences hypermucoviscosity (Wang et al. 2023).

Accession Number:P0ABB0
Protein Name:ATP synthase subunit alpha ATPA aka UNCA aka PAPA aka B3734
Length:513
Molecular Weight:55222.00
Species:Escherichia coli [83333]
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Peripheral membrane protein2
Substrate hydron

Cross database links:

DIP: DIP-31845N
RefSeq: AP_004053.1    NP_418190.1   
Entrez Gene ID: 948242   
Pfam: PF00006    PF00306    PF09378   
BioCyc: EcoCyc:ATPA-MONOMER    ECOL168927:B3734-MONOMER    MetaCyc:ATPA-MONOMER   
KEGG: ecj:JW3712    eco:b3734   

Gene Ontology

GO:0005886 C:plasma membrane
GO:0045261 C:proton-transporting ATP synthase complex, c...
GO:0005524 F:ATP binding
GO:0046933 F:hydrogen ion transporting ATP synthase acti...
GO:0005515 F:protein binding
GO:0046961 F:proton-transporting ATPase activity, rotati...
GO:0042777 P:plasma membrane ATP synthesis coupled proto...

References (13)

[1] “DNA sequence around the Escherichia coli unc operon. Completion of the sequence of a 17 kilobase segment containing asnA, oriC, unc, glmS and phoS.”  Walker J.E.et.al.   6395859
[2] “The atp operon: nucleotide sequence of the region encoding the alpha-subunit of Escherichia coli ATP-synthase.”  Gay N.J.et.al.   6272228
[3] “Nucleotide sequence of the genes coding for alpha, beta and gamma subunits of the proton-translocating ATPase of Escherichia coli.”  Kanazawa H.et.al.   6277310
[4] “Structure and function of H+-ATPase: what we have learned from Escherichia coli H+-ATPase.”  Kanazawa H.et.al.   6301339
[5] “DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication.”  Burland V.D.et.al.   7686882
[6] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[7] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[8] “The nucleotide sequence of the atp genes coding for the F0 subunits a, b, c and the F1 subunit delta of the membrane bound ATP synthase of Escherichia coli.”  Nielsen J.et.al.   6278247
[9] “Isolation of a fourth cysteinyl-containing peptide of the alpha-subunit of the F1 ATPase from Escherichia coli necessitates revision of the DNA sequence.”  Slan-Lotter H.et.al.   2868922
[10] “Comparing the predicted and observed properties of proteins encoded in the genome of Escherichia coli K-12.”  Link A.J.et.al.   9298646
[11] “Directed mutagenesis of the strongly conserved lysine 175 in the proposed nucleotide-binding domain of alpha-subunit from Escherichia coli F1-ATPase.”  Rao R.et.al.   2903146
[12] “Protein complexes of the Escherichia coli cell envelope.”  Stenberg F.et.al.   16079137
[13] “Structural features of the gamma subunit of the Escherichia coli F(1) ATPase revealed by a 4.4-A resolution map obtained by X-ray crystallography.”  Hausrath A.C.et.al.   10570135
Structure:
1D8S   3OAA   5T4O   5T4P   5T4Q   6OQR   6OQS   6OQT   6OQU   6OQV   [...more]

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGVIR IHGLADCMQG EMISLPGNRY 
61:	AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGAPIDGKGP 
121:	LDHDGFSAVE AIAPGVIERQ SVDQPVQTGY KAVDSMIPIG RGQRELIIGD RQTGKTALAI 
181:	DAIINQRDSG IKCIYVAIGQ KASTISNVVR KLEEHGALAN TIVVVATASE SAALQYLAPY 
241:	AGCAMGEYFR DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAFPGDV FYLHSRLLER 
301:	AARVNAEYVE AFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETNLF 
361:	NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ 
421:	LDHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGYLADVE LSKIGSFEAA LLAYVDRDHA 
481:	PLMQEINQTG GYNDEIEGKL KGILDSFKAT QSW