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1.A.83.1.5
The structure of the polyomavirus internal protein including a synthetic fragment of 18 aas in which the C-terminal sequence is derived from Vp2 of 319 aas and a 283 aa fragment of the major capsid protein Vp1, which has a full length of 384 aas, is known (1CN3), providing insight into their involvement in viral entry (Chen et al. 1998). The fragments of Vp1 and Vp2, present in this complex, are derived by proteolysis from two large full length proteins, Vp1 and Vp2 as noted above. These full length proteins are included here under TC# 1.A.83.1.5. There are multiple structures reported in PDB of the Vp1 protein: 1CN3, 1SID, 1SIE, 1VPN, 1VPS, 5CPZ, 5CQ0.

Accession Number:P12908
Protein Name:Minor capsid protein VP2
Length:319
Molecular Weight:34828.00
Species:Murine polyomavirus (strain Crawford small-plaque) (MPyV) [10637]
Number of TMSs:1
Location1 / Topology2 / Orientation3: Virion1
Substrate molecule

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MGAALTILVD LIEGLAEVST LTGLSAEAIL SGEALAALDG EITALTLEGV MSSETALATM 
61:	GISEEVYGFV STVPVFVNRT AGAIWLMQTV QGASTISLGI QRYLHNEEVP TVNRNMALIP 
121:	WRDPALLDIY FPGVNQFAHA LNVVHDWGHG LLHSVGRYVW QMVVQETQHR LEGAVRELTV 
181:	RQTHTFLDGL ARLLENTRWV VSNAPQSAID AINRGASSAS SGYSSLSDYY RQLGLNPPQR 
241:	RALFNRIEGS MGNGGPTPAA HIQDESGEVI KFYQAQVVSH QRVTPDWMLP LILGLYGDIT 
301:	PTWATVIEED GPQKKKRRL