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Accession Number: | Q03518 |
Protein Name: | TAP1 aka ABCB2 aka PSF1 aka RING4 aka Y3 |
Length: | 808 |
Molecular Weight: | 87218.00 |
Species: | Homo sapiens (Human) [9606] |
Number of TMSs: | 8 |
Location1 / Topology2 / Orientation3: | Endoplasmic reticulum membrane1 / Multi-pass membrane protein2 |
Substrate | peptide |
Cross database links:
RefSeq: | NP_000584.2 |
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Entrez Gene ID: | 6890 |
Pfam: | PF00664 PF00005 |
OMIM: |
170260 gene 604571 phenotype |
KEGG: | hsa:6890 |
Gene Ontology
GO:0005829
C:cytosol
GO:0030176
C:integral to endoplasmic reticulum membrane
GO:0042825
C:TAP complex
GO:0043531
F:ADP binding
GO:0005524
F:ATP binding
GO:0042626
F:ATPase activity, coupled to transmembrane m...
GO:0042605
F:peptide antigen binding
GO:0015197
F:peptide transporter activity
GO:0042803
F:protein homodimerization activity
GO:0046978
F:TAP1 binding
GO:0046979
F:TAP2 binding
GO:0019885
P:antigen processing and presentation of endo...
GO:0046967
P:cytosol to ER transport
GO:0006955
P:immune response
GO:0019060
P:intracellular transport of viral proteins i...
GO:0015833
P:peptide transport
GO:0055085
P:transmembrane transport
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References (23)[1] “Sequences encoded in the class II region of the MHC related to the 'ABC' superfamily of transporters.” Trowsdale J.et.al. 2259383 [2] “DNA sequence analysis of 66 kb of the human MHC class II region encoding a cluster of genes for antigen processing.” Beck S.et.al. 1453454 [3] “Evolutionary dynamics of non-coding sequences within the class II region of the human MHC.” Beck S.et.al. 8568858 [4] “The DNA sequence and analysis of human chromosome 6.” Mungall A.J.et.al. 14574404 [5] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).” The MGC Project Teamet.al. 15489334 [6] “TAP1 alleles in insulin-dependent diabetes mellitus: a newly defined centromeric boundary of disease susceptibility.” Jackson D.G.et.al. 8248212 [7] “A gene in the human major histocompatibility complex class II region controlling the class I antigen presentation pathway.” Spies T.et.al. 2259384 [8] “New allelic polymorphisms in TAP genes.” Szafer F.et.al. 8168860 [9] “Two putative subunits of a peptide pump encoded in the human major histocompatibility complex class II region.” Bahram S.et.al. 1946428 [10] “Molecular mechanism and species specificity of TAP inhibition by herpes simplex virus ICP47.” Ahn K.et.al. 8670825 [11] “Multiple regions of the transporter associated with antigen processing (TAP) contribute to its peptide binding site.” Nijenhuis M.et.al. 8955196 [12] “Downregulation of TAP1 in B lymphocytes by cellular and Epstein-Barr virus-encoded interleukin-10.” Zeidler R.et.al. 9310490 [13] “The ER-luminal domain of the HCMV glycoprotein US6 inhibits peptide translocation by TAP.” Ahn K.et.al. 9175839 [14] “Splice acceptor site mutation of the transporter associated with antigen processing-1 gene in human bare lymphocyte syndrome.” Furukawa H.et.al. 10074494 [15] “Adenovirus E19 has two mechanisms for affecting class I MHC expression.” Bennett E.M.et.al. 10227971 [16] “The human cytomegalovirus gene product US6 inhibits ATP binding by TAP.” Hewitt E.W.et.al. 11157746 [17] “Cytoplasmic domains of the transporter associated with antigen processing and P-glycoprotein interact with subunits of the proteasome.” Begley G.S.et.al. 15488952 [18] “Specific targeting of the EBV lytic phase protein BNLF2a to the transporter associated with antigen processing results in impairment of HLA class I-restricted antigen presentation.” Horst D.et.al. 19201886 [19] “Structure of the ABC ATPase domain of human TAP1, the transporter associated with antigen processing.” Gaudet R.et.al. 11532960 | |
Structure: | |
External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MAELLASAGS ACSWDFPRAP PSFPPPAASR GGLGGTRSFR PHRGAESPRP GRDRDGVRVP 61: MASSRCPAPR GCRCLPGASL AWLGTVLLLL ADWVLLRTAL PRIFSLLVPT ALPLLRVWAV 121: GLSRWAVLWL GACGVLRATV GSKSENAGAQ GWLAALKPLA AALGLALPGL ALFRELISWG 181: APGSADSTRL LHWGSHPTAF VVSYAAALPA AALWHKLGSL WVPGGQGGSG NPVRRLLGCL 241: GSETRRLSLF LVLVVLSSLG EMAIPFFTGR LTDWILQDGS ADTFTRNLTL MSILTIASAV 301: LEFVGDGIYN NTMGHVHSHL QGEVFGAVLR QETEFFQQNQ TGNIMSRVTE DTSTLSDSLS 361: ENLSLFLWYL VRGLCLLGIM LWGSVSLTMV TLITLPLLFL LPKKVGKWYQ LLEVQVRESL 421: AKSSQVAIEA LSAMPTVRSF ANEEGEAQKF REKLQEIKTL NQKEAVAYAV NSWTTSISGM 481: LLKVGILYIG GQLVTSGAVS SGNLVTFVLY QMQFTQAVEV LLSIYPRVQK AVGSSEKIFE 541: YLDRTPRCPP SGLLTPLHLE GLVQFQDVSF AYPNRPDVLV LQGLTFTLRP GEVTALVGPN 601: GSGKSTVAAL LQNLYQPTGG QLLLDGKPLP QYEHRYLHRQ VAAVGQEPQV FGRSLQENIA 661: YGLTQKPTME EITAAAVKSG AHSFISGLPQ GYDTEVDEAG SQLSGGQRQA VALARALIRK 721: PCVLILDDAT SALDANSQLQ VEQLLYESPE RYSRSVLLIT QHLSLVEQAD HILFLEGGAI 781: REGGTHQQLM EKKGCYWAMV QAPADAPE