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3.A.1.132.11
Putative ABC exporter with two membrane proteins of 478 and 417 aas and 6 TMSs respectively, and one ATPase.  The encoding genes are adjacent to a TonB-dependent OMR with possible specificity for a siderophore.  Thus, this ABC exporter could transport a siderophore.

Accession Number:Q21EL4
Protein Name:ABC transporter related
Length:249
Molecular Weight:26574.00
Species:Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [203122]
Number of TMSs:1
Substrate Siderophores

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MTILQAESLN IMRSGKQVLN GISFQVAAGE VYALLGGNGA GKSTTLLSFL GFLSPTSGSV 
61:	SVNNQDVYKD VASARKAMAY LPESASLYEH LNAYENIDYF MQLAGGAVNR ADIETALERV 
121:	SLAQGARQNK LRGYSKGMRQ KVAIALAILR DSSILLLDEP TSGLDPSAID EFHQLVRDLA 
181:	DSGKAVLMVT HDVYGACQVA DKIGLLHSGL LVGEFVAEHA RIDTETVHKA FASTVDHASS 
241:	VRSAMLEQG