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3.A.1.132.11
Putative ABC exporter with two membrane proteins of 478 and 417 aas and 6 TMSs respectively, and one ATPase.  The encoding genes are adjacent to a TonB-dependent OMR with possible specificity for a siderophore.  Thus, this ABC exporter could transport a siderophore.

Accession Number:Q21EL5
Protein Name:ABC-2 type transport system permease protein
Length:478
Molecular Weight:53423.00
Species:Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) [203122]
Number of TMSs:6
Substrate Siderophores

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKQLMLIAHD EWRYWCRSQV VLVATLIFLA LILATNFISA ARLSSESETR TQHQSEAEQA 
61:	FLAQPDRHPH RMVHYGHYLF RTPVPLSLFD PGLDAITGQA IFLEGHRQNS LTFSEAGASA 
121:	DFGGLSWLSP ALMYQLFAPL MIVLLGHSAL VREREASVLS PILALGVSGR KLMAGKAVAL 
181:	TFFTTLLLVP LIIGALLAYF QGERLGALLA LIAVYFFYCL VWVVLTLLVS TLVKRRSEVL 
241:	IVMLSFWCVV SLVLPALAVN IVSSYKASAG KIESDLAMQR DIEKLGNGHN ANDPAFLKLR 
301:	SDLLEQHNVD HVEDLPVNFR GIVALEGERK LTELLNQYAE ARMQAEQEQE RSLAKYGFIS 
361:	PVLAVTFASR AIAATDLAHY HRFQREAEAL RFDFVQGLNR AHAEKLSYQL DIHRYKDEAS 
421:	AQRARVDASN WQVLNSYEFI AADSSQRLAR AASSLLNLFL WLLISMVALV WRSGSIKP