3.A.16.1.1 Mammalian ER retrotranslocon. The Grp170 protein plays a role during ERAD, positioning
this client-release factor at the retrotranslocation site, allowing a
mechanism to couple client release from BiP and retrotranslocation (Inoue and Tsai, 2016). The cryo-EM structure of the ERAD protein channel, formed by tetrameric human Derlin-1, has been solved (Rao et al. 2021).
The structure shows that Derlin-1 forms a homotetramer that encircles a
large tunnel traversing the ER membrane. The tunnel has a diameter of
about 12 to 15 angstroms, large enough to allow an α-helix to pass
through. The structure shows a lateral gate within the membrane,
providing access of transmembrane proteins to the tunnel. Thus, Derlin-1
forms a protein channel for translocation of misfolded proteins. This
structure is different from the monomeric yeast Derlin structure
previously reported, which forms a semichannel with another protein (Rao et al. 2021).
|
Accession Number: | Q541A5 |
Protein Name: | Ubiquitin fusion degradation 1-like aka ufd1 |
Length: | 307 |
Molecular Weight: | 34500.00 |
Species: | Homo sapiens (Human) [9606] |
Number of TMSs: | 1 |
Location1 / Topology2 / Orientation3: |
Endoplasmic reticulum membrane1 / Multi-pass membrane protein2 |
Substrate |
|
---|
1: MFSFNMFDHP IPRVFQNRFS TQYRCFSVSM LAGPNDRSDV EKGGKIIMPP SALDQLSRLN
61: ITYPMLFKLT NKNSDRMTHC GVLEFVADEG ICYLPHWMMQ NLLLEEGGLV QVESVNLQVA
121: TYSKFQPQSP DFLDITNPKA VLENALRNFA CLTTGDVIAI NYNEKIYELR VMETKPDKAV
181: SIIECDMNVD FDAPLGYKEP ERQVQHEEST EGEADHSGYA GELGFRAFSG SGNRLDGKKK
241: GVEPSPSPIK PGDIKRGIPN YEFKLGKITF IRNSRPLVKK VEEDEAGGRF VAFSGEGQSL
301: RKKGRKP