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3.A.1.142.1
Glycolipid translocase (flippase) Spr1816/Spr1817 (R.Hakenbeck, personal communication)

Accession Number:Q8DNC0
Protein Name:Putative uncharacterized protein
Length:255
Molecular Weight:28822.00
Species:streptococcus pneumoniae (strain atcc baa-255 / r6) [171101]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Glycolipids

Cross database links:

eggNOG: COG0842
HEGENOM: HBG700931
RefSeq: NP_359408.1   
Entrez Gene ID: 933597   
Pfam: PF01061   
BioCyc: SPNE171101:SPR1816-MONOMER   
KEGG: spr:spr1816   

Gene Ontology

GO:0016020 C:membrane

References (1)

[1] “Genome of the bacterium Streptococcus pneumoniae strain R6.”  Hoskins J.et.al.   11544234

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MKRRRREITK MKRWIALSKI EFLLTKRQLI YYLLSVGMPT AFYLFFSGIY QDTPGELANF 
61:	MRDYLISMTA FSMMSTAIFS FPVVLHTDKI NNWQKTLRHS PVNMVEYYLS KITSMLVDYL 
121:	VSILVVFSVG HFVRGVDMSL GNWIGAALLL IVGSIAFVAL GLTLTLLPTS QLMSVVGNLL 
181:	YLGLAVLGGL WMPISLFPDW MQVVGKCLPT YQLMELLKTF LNEGGINLSA TVYLLVFSVV 
241:	LFGLTIYLQG HKENA