1.I.3.1.1
The bacterial (Planctomycetes) Nuclear Pore-like Complex, B-NPC (Sagulenko et al. 2017). Several proteins were found to associate with the pore-containing membranes, and some were found to possess structural domains found in eukaryote nuclear pore complexes (Sagulenko et al. 2017). Six proteins, shown to be associated with the B-NPC structure, are listed under this TC#. They show sequence similarity with members of autotransport families 1 and 2 (TC#s 1.B.12 and 1.B.40) as well as members of a bacterial pore-forming toxin family (e.g., TC# 1.C.75). However these proteins have an unusual amino acid composition with lots of As, Gs, D, and Es, possibly (partially) accounting for the good scores.
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| Accession Number: | WP_010035418.1 |
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| Protein Name: | WP_010035418.1 FG-GAP repeat protein [Gemmata obscuriglobus] |
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| Length: | 1707 |
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| Molecular Weight: | |
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| Species: | Gemmata obscuriglobus [114] |
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| Substrate |
molecule, macromolecule |
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1: MPNWSKQMFK SQQPTRPVHL APRLGVEALE DRSVPATVIT IQEAAGSLDG FLSATDGTIA
61: LNDLAGQAGT LSRAALQGVG AGVAISIAAE NAIVFDASLT APVALQTDGT ASAAFVASNG
121: NLAFASAKSL TTSGADLTLT STNGVLTVAN LATSGGNVTL NADAVNVLAG VQVNAGTNPT
181: RSIVTVQPVT NTVNVDLGGA GSAGTIGLTD AELDTITARV LRVGSLTATG TIAVTAPITL
241: AGGAVPTLSL RTGNNTATAV TQTAPLSVTN LAVQSAGTVV LTTPGNDVTT LAASVTGAGN
301: AFRFTDTNAL VLGTVDGVAG AATTTAPGSQ VTLSAGALTQ AAGANVTTSE LELLGAGPVT
361: LTNAGNNVAT LAASVAGALS YTDADALTVG IVGGTSGVAT TNSAIVIATT DGDLSITNGN
421: AGPTPDVNAG TGTVSLTAGG AAGQNRLLAV AIDAGVTGTG GVTLTANDVE IEADVDAGAQ
481: LLLVQPFEAS TPINLGTNTV GAFALTDAEI DFLITTGAVR IGNAAAGNID VSAAITVDGA
541: SQLELITGGG VMDNNSGAQD ISVARLAITA GTGIGVVGTN TPNLELSVTN LEATTATGGI
601: GISNFGELVI GGVTGALSGL SVTTSGAIAI TVTGSLTVGA TPTEGVSVAG GGNITLTPSN
661: DLAINAPVIA SGGNGNITLS ARNDITVDAT VTVAGTGNIT AGADSDNNGG GNFSNTAALT
721: TAGGDITISA QDIELNAAAT TTTAASGDIF LLTRDPADVI NLGTNTGFGL TNADLNNVTT
781: ATLHIGSATN TGGIAVTGQI TLGGAVPVLS LETSGAITDA TGAEQTDITV ASLTLLAGRA
841: GAGGIGATGV GGLDVAVTNL AAANSSPDTG EIVIANASAA LNVGTVAGRA GVVNQNTAGG
901: VVLSSTGGIA LAATVSGATG VAVSTSGGDL NTTAPVSSST GAVQLTASGA VSIGGAVSGT
961: GATVTAGTTL TTTAAATVTV GGAGSVALTA SAGALSVGAS VAAGIGGVTL TATDTAATTN
1021: TVTVAAGVSV STTAATLTIN AGDAVTIGGT LTTVAGGTVN VNVDAGAVDV GVGGAVTFSA
1081: TSNVSGATVM NVTGGADDDT FNLRPLTTGI TTNLIAAAGA DTLNIDLTAA TASAFGNITA
1141: VGTGTFSFGN RGSVVATGLE SVAATGGTYA LNIGLQTAGF QDGNASPDVT TVSNTGSALN
1201: VTVQANSTGA TQTLFSGRTG DVSTLTVTGS TDRDTVTVDL TNPLPAVTVV GGGPTTIPGD
1261: TLNLITTNAN GATFTPVVGG GTYTFANRSA VTFSQIEVGP APVLRVAASD ASAAEGATPD
1321: TGTFTITRVG DTSAALTVTY TLSGTAVNGV SYQALTGTVT FAPGASTATV TLTPIDNSSV
1381: DGTRTAVLTL SPSASYEIAA GASQATIAIA DNDALGRRLV VGSSASGTVQ VLDNSSNTAV
1441: ASFRPYAGYQ GGVSVAVGDV TGDGVADIVT GATALSPHVK VFDGVTFKEI RSFFAFTNFA
1501: SGVSVAVGDL DNDGKSEIIV GAGTLAPHVK VFDATTLQER ASFYAFTLTT GAPIASGITV
1561: AAGDTDGDGR AEIVVGATVA PHVKTFDLAG NTLRSFLVPN LPPDTGISVG TGDLDGDKRA
1621: ELLVGARVGG QAVTTVFQGE AAIGQFSSGA VATTPRVAGT DRDGDGKDEL ILTLGPTVSV
1681: RSGTFPFDQL STLTPFTGFN GGVFVG