1.I.3.1.1
The bacterial (Planctomycetes) Nuclear Pore-like Complex, B-NPC (Sagulenko et al. 2017). Several proteins were found to associate with the pore-containing membranes, and some were found to possess structural domains found in eukaryote nuclear pore complexes (Sagulenko et al. 2017). Six proteins, shown to be associated with the B-NPC structure, are listed under this TC#. They show sequence similarity with members of autotransport families 1 and 2 (TC#s 1.B.12 and 1.B.40) as well as members of a bacterial pore-forming toxin family (e.g., TC# 1.C.75). However these proteins have an unusual amino acid composition with lots of As, Gs, D, and Es, possibly (partially) accounting for the good scores.
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| Accession Number: | WP_010044366.1 |
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| Protein Name: | WP_010044366.1 hypothetical protein [Gemmata obscuriglobus] |
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| Length: | 2559 |
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| Molecular Weight: | |
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| Species: | Gemmata obscuriglobus [114] |
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| Substrate |
molecule, macromolecule |
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1: MLPSWLRQLF RNKFTGHGTV APFQNALTLE ALENRAMPAI ITWTGGAVPD FDFNGSGTTN
61: VGPVDANGAP VNPNDVGESG DLSWSNPLNW DLGVPTSGDD VVFETAAFYG GTLPRSANYF
121: KYYTTDRFVP TPNSVMDLTQ TVRSITIKDA GWLIVDQVVD EPLFPQGNAP TNLGTLTVTD
181: GITYLGAGSS TLYFRMQLSN EAQNFTATNA AGTLNIIGNI GTSPAAANPS QVGFIKLGDG
241: TISLGGRNPV TGAAGGNNTF AGLVEVQQGV LLANSNNALG LTAVGTNVLN GATLRVNVSN
301: FRESLTIQGT GVGGQGALFG GDGVDPLTGG TVLNGVTLNP SATVGGRLTI SGVVSGSGNL
361: TTIGTITLTT ANTYGGVTFV NAGSLAISND DALSPGSYTV VSSGATLALL SNPVSGARVI
421: DDELLILNGT GLADTGNNNQ PLGALFAQGA NRTTPAEWRS AIFLEGNATI GVFDGGALLV
481: SGHLANLPAS AAATALLTPT EALSLQAYRA LNRPVVANAS LSKWGKGTVI FPNPNLEFSG
541: NTFVNNGVLV MQGPNVLGPA TRTTAPRGGA ITVNSDITNQ SFGTLELQGQ YTLQKNLTLN
601: GPGYTGGALS ITDNAATPAV HTVIDVAGTV TIASTTTISN DPNTDLTISG VIGGAAGQNL
661: TKVGTGTVSI TNTNTFLGAL TLRNGVTTVT RGGGFGGTGG AGTTVASGAA LVLASGITVQ
721: NEALTLTSAA GSSAALQVSS GTNVWTGTVS VIGNNQIGPG DEAIINVTGA TGSLEFSNVV
781: SGDAKIRKLG AGELKLTGTA SNTFVDTLQI EQGTVSLKKI APVGTTVNAV AGAIIVGDGQ
841: GGNNADVLRL DAPNQIPDTR AITVNSSGLF DLNGSNETVG PLALQGGEVT TGAGSLILTT
901: NVATFGSSEM SRITGNVFLG STTRTFTFLP GAATTFSANR NPAQAGGTVT LTFTVTGNPG
961: DPVPTGTVSF FDGNIFLGTA TVLAGTATFT VQANVLTVGA HTITAVYTGD ANYAPSTVPL
1021: DQSLVIVNPS ERAVLTSSAS PALAGQVITF TFNLPPRAGE AVPTGTVQFF DGPNPIGAPV
1081: ALSALGTATY MTTLPVGSHQ ITAAYSGDGT YSPVQVTLAN QQVGTPAQLV LRSSGNPVAP
1141: GSPVTFTFIA SGDSSAPTPG GSVQFFDNGV AIGAPVALDA NGVATLTTSA LTVGTHTITA
1201: AYTGDANVYL PGVVPLAPTL VVGGTPLLTV ISGANQAIAA SAVPLTFIAT GRAGDPVPTG
1261: TVQFFDNGVG IGAPVALVNG QATISPTTLG VGSRTITAVY SGDNFYAGGT GRLTANQTII
1321: AAPTPAAGTI AGIVSSSSNS VTSNGNVTFT FTAIPPSGGV IPNGTVQFFD GTTPIGAPVA
1381: LNTVGNNGVA SVTTSGLTPG THTIRAQYFG GNYTANTYTL TPAQVVVNPY IIQVSSSNNP
1441: AGVTENVTFT ANFITLPGAP ALTGTVSFYD NGVQIGTIQN VVGGSASVTT PNLTPGTHTI
1501: TVRYFGSGGL TPTYAPTVTD VPLAPSQVVG VPPIMLLTSN LNPAPPGSLV TLTFVASGKA
1561: GDPVPAGSVQ FFDNGVPIGG TVPLNAGSAT RDVSFTPGTH TITAQFIPEN GNTNYTSGVA
1621: TLVPSQVVTT PAAIQLTADN NPTATGANVT FTYRLTPGTN DPVPTGTVQF FDGATPISGQ
1681: VILVNGVATL TTNTLTIGTH TITAVFTSGD SNYQSNQATF NNLVVSNPPL PPLAPPPTIV
1741: GAAQPTLQMN AVMSGAAGAG VIKTGSGQLV LNAVNTYTGT TTVNGLNGAI VVGVNNALPD
1801: TGVVVTTGTL TVNPGVSDQV ASLTGAGTLD LGAGGNLATG VSNGNDTFAG PITGSGTLTK
1861: VGAGTLTLTG NSPAYTGSSV VAGGTLLVTA NQSSASVVVQ GGATLGGTGT VGAVTVNPGG
1921: VLAPGTSPGI LNSTGNLTFS AGSTFLVEVN GTTVGTQYDR YVTTGTANLN GATLGFNLGF
1981: TPTLGDSFTI LTAAGGVSGA FNGLPDQGTF TLNNRVYQVS YLATSVVVTQ VANATTTSLV
2041: SNNNPSLPGS AVTFTFTITP TAGADPMPLG TVQFQDNGVN IGAPVTLTAG SGNSAVAVLT
2101: TSALVNGSHT ITAVYTPQTV PTASPYLTAT AAIVQAVTVP STTTLTALQG PVVFGSVTSF
2161: LAGVGEQSGL QTPTGTFTFT NSATGAVLGV VALDATGRAV FSTAALPPGT ATVTVTYSGD
2221: SFYRASTATV TQVVDRQNRV VVGSDAGPVA TVQVFDSTTG ALVGTFQPFD QYTGGVKVAT
2281: GDVNNDGVAD IVVSAGAGAP GGHVKVYDGV SFGLLSSFFT FLGYNGGVNV AVGDVDGDGF
2341: GDVVIGTAAS NDHVKAFSGR SLLNGGIAAN GTADPSTILS FFAYGGGNPV GVTVAAGDVD
2401: GDGRADVITG SATFAGHVKA FSASGQQIGS YFAYGAGYLG GIYVAAGDLD GDGRAEIVTG
2461: ATNAPHVKAL RLDGSEVASF FAYTNGNGSP APFGVRVAVA DRNGDRLADI LTGSAGGAPH
2521: VKAFSGLDPS LLLDSFIAIP PGQAPSTSGV FVGGSAPK