1.I.3.1.1
The bacterial (Planctomycetes) Nuclear Pore-like Complex, B-NPC (Sagulenko et al. 2017). Several proteins were found to associate with the pore-containing membranes, and some were found to possess structural domains found in eukaryote nuclear pore complexes (Sagulenko et al. 2017). Six proteins, shown to be associated with the B-NPC structure, are listed under this TC#. They show sequence similarity with members of autotransport families 1 and 2 (TC#s 1.B.12 and 1.B.40) as well as members of a bacterial pore-forming toxin family (e.g., TC# 1.C.75). However these proteins have an unusual amino acid composition with lots of As, Gs, D, and Es, possibly (partially) accounting for the good scores.
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| Accession Number: | WP_029601055.1 |
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| Protein Name: | WP_029601055.1 hypothetical protein [Gemmata obscuriglobus] |
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| Length: | 914 |
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| Molecular Weight: | |
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| Species: | Gemmata obscuriglobus [114] |
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| Number of TMSs: | 5 |
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| Substrate |
molecule, macromolecule |
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1: MTSGFTATNN NYRILADAFT DPASPNFVSP GDTVILSGNF DWTEPNAAAA WALGNDGLAD
61: TGDEYAITIN DGLDNVTVTA ASLGSAVIQG PGDLPDFDLE GAFYFPGGAG TNTGWTFSNL
121: TLLDFDLGIG MYGDPSGAGA GAYSGTTITN NRIRIATDLS TAAAPADVSQ NIGINFSFGT
181: GQTISNNLIE IPGDVAGSTA NSSTVGIQSE TFFPGTYEGL RITGNTIRVL NAAAVANPQR
241: IVGIWENGHS HGSNITVSGN QFLNAAGVNP AANLQQAFVI TSHSGPDGVV TYAGNTVTGA
301: NVGLAWLSPV EFPGYDFSSN GPVLVLGNTL TNVQTGILIQ SKGVAQLGGG NVITGTATGT
361: GVSIQAGSVA TIFNGSFTGT GVGIDVNGGT ALIQGADLNN NAIAGLRVQT VTIPQGEEIP
421: PLVFVGLADA GGGGTALGTS TGGNNFANYL PTGAARAIIN LNAAGAGANT SARNNTFASD
481: SLAFIEQVVD HSVDVATRGT VDFSSPAAAG NVAPAVANQT FELPIGSPAG ALVGQVVASD
541: ANSNPLAYSI TDGNTGGAFA IDAATGRLTV AVPAALGTGT FNLTVQVSDG LTVSTATVTV
601: TLFDSTGGAN DPGPAATPVY LTAVGADAGA NGHVKVYNQD GSLRFSFFAF DGFNGGVRVA
661: TGDVNGDQVE DIVVGAGAGA AGGHVKVFDG ATGALISSFF SFSGFTGGVN VAVGDVDGDG
721: RGDIVVGTGS GAAHVKAFSF ANNTLLSSFI AFDGSTGGVT VAAGNYDGTG ADEIVVGSAT
781: GPAHVKAFTR TGSTVLSFIA FSGFNGGVNV AAGDLNADGF AELVVGTGPG VNGQVKVFQR
841: TTVATGGATI ATIPGTGGAR VALGRLNSDA VPDILVGPGP GSNALVRTFD GSNFTALSAI
901: AAFDGFLGGV FVG