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1.A.1.14.9
Bacterial type voltage-activated sodium channel of 718 aas, NaV.

Accession Number:B5Y4G4
Protein Name:Bacterial type voltage activated sodium channel
Length:718
Molecular Weight:78824.00
Species:Phaeodactylum tricornutum (strain CCAP 1055/1) [556484]
Number of TMSs:4
Substrate sodium ions

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence 
1:	MKRRLPIDSV GTGRRNPKKP TEFDHQGNDQ QVELGLQETQ TRAAVAAQRH GRRLNHSEET 
61:	AGDDSALSHL PHGSQMSTEP TNGKSYRSSR GELPIMRFQD SEAAAAASSV SASSQSSPTN 
121:	QSEAGSNLPG SPMLGARAPL SAGASSRPFR KSLISNLMDL PSESHWEDRV SVERPKSIVR 
181:	RARLLCGKVV EAPAVQLTIV TLIVINAILM GVATFDFVTD RPHINRAFET TDRVFLIIFT 
241:	IELSLQFIYR SLGLFMDGWL VFDFVIVITS WSLESLQIIR AFRVFRAFRL INRVGPLREL 
301:	IMALGTVMPR MYAIGTLLLL IFYVYAVLFT ELFRDLELSE NYFGSLDVAL FSCMQFMTLE 
361:	WADTARECME QRSWAWMPFV SFIAITGFIV FNLIVAVVCD AVSVVDQQSR ADKAGNVETD 
421:	LMKLHHAQER LQELSETVDD MRTRHEKLQR TILLLGTTLQ SSSAIRPRLQ GKTHPGSLLG 
481:	PSMSDNDDSP QIGSSSSHSN GEENDGVGNE DDKARGFSEY QALSIQSHTL SETTMDPLMA 
541:	SFTVRSQQSD TNLTQSSTSL SAYISAGSTS LEGAEARTTD ALASVQSQRA PWAPKTLSES 
601:	LLQRGEADSE PSESIGEGWE DSEEAVTMAS LAMRGYLNPS STQRSRPNRA SSPATAATEQ 
661:	SSATTVDPNG EATQNQQNGT ERKSSSGTTT TKVTAREEMP PMAKAMEGVM HPLSLMLR