TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.1.2.5
Voltage-gated K+ channel subfamily D, member 2, Kv4.2 or KCND2, in neurons and muscle; forms complexes with auxiliary subunits and scaffolding proteins via its N-terminus, influencing trafficking, temperature-sensitivity and gating (Radicke et al. 2013).These subunits are (1) dipeptidyl-peptidase-like type II transmembrane proteins typified by DPPX-S (e.g., protein 6, P42658; 865 aas, TC#8.A.51), and (2) cytoplasmic Ca2+ binding proteins known as K+ channel interacting proteins (KChIPs; TC#8.A.82.2.2; Q6PIL6) (Seikel and Trimmer 2009).  The C-terminus interacts with KChIP2 to influence gating, surface trafficking and gene expression (Han et al., 2006; Schwenk et al., 2008). KChIPs (250 aas for mouse KChIP4a; Q6PHZ8) are homologous to domains in NADPH oxidases (5.B.1). Heteropoda toxin 2 (P58426; PDB 1EMX; TC#8.B.5.2.2) interactions with Kv4.3 and Kv4.1 give rise to differences in gating modifications (DeSimone et al., 2011).  Mutations cause autism and seizures due to a slowing of channel inactivation (Lee et al. 2014).  The stoichiometry of Kv4.2 and DPP6 is 4:4 (Soh and Goldstein 2008). Neferine, an isoquinoline alkaloid from plants, inhibits Kv4.3 channels, probably by blocking the open state (Wang et al. 2015). SUMOylating (derivatizing with a small ubiquitin-like modifier) at two distinct sites on Kv4.2 increases surface expression and decreases current amplitude (Welch et al. 2019). Modulation of voltage-gated potassium (Kv) channels by auxiliary subunits is central to the physiological function of channels in the brain and heart. Native Kv4 tetrameric channels form macromolecular ternary complexes with two auxiliary beta-subunits-intracellular Kv channel-interacting proteins (KChIPs) and transmembrane dipeptidyl peptidase-related proteins (DPPs)-to evoke rapidly activating and inactivating A-type currents, which prevent the backpropagation of action potentials (see above). Kise et al. 2021 investigated the modulatory mechanisms of Kv4 channel complexes, reporting cryo-EM structures of the Kv4.2-DPP6S-KChIP1 dodecameric complex, the Kv4.2-KChIP1 and Kv4.2-DPP6S octameric complexes, and Kv4.2 alone. The structure of the Kv4.2-KChIP1 complex revealed that the intracellular N terminus of Kv4.2 interacts with its C-terminus that extends from the S6 gating helix of the neighbouring Kv4.2 subunit. KChIP1 captures both the N and the C terminus of Kv4.2. Thus, KChIP1 prevents N-type inactivation and stabilizes the S6 conformation to modulate gating of the S6 helices within the tetramer. Unlike the reported auxiliary subunits of voltage-gated channel complexes, DPP6S interacts with the S1 and S2 helices of the Kv4.2 voltage-sensing domain, which suggests that DPP6S stabilizes the conformation of the S1-S2 helices. DPP6S may therefore accelerate the voltage-dependent movement of the S4 helices. KChIP1 and DPP6S do not directly interact with each other in the Kv4.2-KChIP1-DPP6S ternary complex. Thus, two distinct modes of modulation contribute in an additive manner to evoke A-type currents from the native Kv4 macromolecular complex (Kise et al. 2021).

Accession Number:Q9NZV8
Protein Name:Voltage-gated potassium channel subunit Kv4.2
Length:630
Molecular Weight:70537.00
Species:Homo sapiens (Human) [9606]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate potassium(1+)

Cross database links:

RefSeq: NP_036413.1   
Entrez Gene ID: 3751   
Pfam: PF00520    PF02214    PF11601   
OMIM: 605410  gene
KEGG: hsa:3751   

Gene Ontology

GO:0009986 C:cell surface
GO:0043197 C:dendritic spine
GO:0008076 C:voltage-gated potassium channel complex
GO:0046872 F:metal ion binding
GO:0006813 P:potassium ion transport
GO:0001508 P:regulation of action potential
GO:0007268 P:synaptic transmission
GO:0055085 P:transmembrane transport

References (17)

[1] “Isolation and characterization of the human gene encoding Ito: further diversity by alternative mRNA splicing.”  Kong W.et.al.   9843794
[2] “Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.”  Kikuno R.et.al.   10470851
[3] “Characterization of human Kv4.2 mediating a rapidly-inactivating transient voltage-sensitive K+ current.”  Zhu X.-R.et.al.   10551270
[4] “Gene structures and expression profiles of three human KCND (Kv4) potassium channels mediating A-type currents I(TO) and I(SA).”  Isbrandt D.et.al.   10729221
[5] “The DNA sequence of human chromosome 7.”  Hillier L.W.et.al.   12853948
[6] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).”  The MGC Project Teamet.al.   15489334
[7] “Localization and enhanced current density of the Kv4.2 potassium channel by interaction with the actin-binding protein filamin.”  Petrecca K.et.al.   11102480
[8] “Modulation of A-type potassium channels by a family of calcium sensors.”  An W.F.et.al.   10676964
[9] “Conserved Kv4 N-terminal domain critical for effects of Kv channel-interacting protein 2.2 on channel expression and gating.”  Baehring R.et.al.   11287421
[10] “Molecular cloning and characterization of CALP/KChIP4, a novel EF-hand protein interacting with presenilin 2 and voltage-gated potassium channel subunit Kv4.”  Morohashi Y.et.al.   11847232
[11] “PKA modulation of Kv4.2-encoded A-type potassium channels requires formation of a supramolecular complex.”  Schrader L.A.et.al.   12451113
[12] “Modulation of Kv4.2 channel expression and gating by dipeptidyl peptidase 10 (DPP10).”  Jerng H.H.et.al.   15454437
[13] “Protein-protein interactions of KChIP proteins and Kv4.2.”  Lin Y.-L.et.al.   15358149
[14] “Ito channels are octomeric complexes with four subunits of each Kv4.2 and K+ channel-interacting protein 2.”  Kim L.A.et.al.   14623880
[15] “Three-dimensional structure of I(to); Kv4.2-KChIP2 ion channels by electron microscopy at 21 Angstrom resolution.”  Kim L.A.et.al.   14980201
[16] “Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.”  Scannevin R.H.et.al.   14980207
[17] “Kv4 potassium channels form a tripartite complex with the anchoring protein SAP97 and CaMKII in cardiac myocytes.”  El-Haou S.et.al.   19213956

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MAAGVAAWLP FARAAAIGWM PVASGPMPAP PRQERKRTQD ALIVLNVSGT RFQTWQDTLE 
61:	RYPDTLLGSS ERDFFYHPET QQYFFDRDPD IFRHILNFYR TGKLHYPRHE CISAYDEELA 
121:	FFGLIPEIIG DCCYEEYKDR RRENAERLQD DADTDTAGES ALPTMTARQR VWRAFENPHT 
181:	STMALVFYYV TGFFIAVSVI ANVVETVPCG SSPGHIKELP CGERYAVAFF CLDTACVMIF 
241:	TVEYLLRLAA APSRYRFVRS VMSIIDVVAI LPYYIGLVMT DNEDVSGAFV TLRVFRVFRI 
301:	FKFSRHSQGL RILGYTLKSC ASELGFLLFS LTMAIIIFAT VMFYAEKGSS ASKFTSIPAA 
361:	FWYTIVTMTT LGYGDMVPKT IAGKIFGSIC SLSGVLVIAL PVPVIVSNFS RIYHQNQRAD 
421:	KRRAQKKARL ARIRAAKSGS ANAYMQSKRN GLLSNQLQSS EDEQAFVSKS GSSFETQHHH 
481:	LLHCLEKTTN HEFVDEQVFE ESCMEVATVN RPSSHSPSLS SQQGVTSTCC SRRHKKTFRI 
541:	PNANVSGSHQ GSIQELSTIQ IRCVERTPLS NSRSSLNAKM EECVKLNCEQ PYVTTAIISI 
601:	PTPPVTTPEG DDRPESPEYS GGNIVRVSAL