TCDB » SEARCH

« See all members of the family

1.A.1.5.27 CNGC15 of 678 aas and 6 TMSs. In Medicago truncatula, three such channels, CNGC15a, b and c, are required for nuclear calcium oscillations, spiking and subsequent symbiotic responses. These three channels form a complex with the potassium permeable channel, DMI1 (TC# 1.A.1.23.1), in the nuclear envelope. They are expressed in flowers and pods, and mutants in these channels have decreased fertilization rates (Charpentier et al. 2016).
Accession Number:	Q9SL29
Protein Name:	Putative cyclic nucleotide-gated ion channel 15
Length:	678
Molecular Weight:	78723.00
Species:	Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:	7
Location¹ / Topology² / Orientation³:	Cell membrane¹ / Multi-pass membrane protein²
Substrate	Ca2+

BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
CDD Search (Conserved Domain Database)
Search COGs (Clusters of Orthologous Groups of proteins)

Predict TMSs (Predict number of transmembrane segments)

FASTA formatted sequence

1:	MGYGNSRSVR FQEDQEVVHG GESGVKLKFK INGTQINNVK MMSKGKFLKA KVLSRVFSED 
61:	LERVKTKILD PRGQTIRRWN KIFLIACLVS LFVDPLFFFL PVMRNEACIT IGVRLEVVLT 
121:	LIRSLADAFY IAQILIRFRT AYIAPPSRVF GRGELVIDSR KIAWRYLHKS FWIHLVAALP 
181:	LPQVLIWIII PNLRGSPMTN TKNVLRFIII FQYVPRMFLI FPLSRQIIKA TGVVTETAWA 
241:	GAAYNLMLYM LASHVLGACW YLLAVERQEA CWRHACNIEK QICQYRFFEC RRLEDPQRNS 
301:	WFEWSNITTI CKPASKFYEF GIFGDAVTST VTSSKFINKY FYCLWWGLKN LSSLGQNLAT 
361:	STYAGEILFA IIIATLGLVL FALLIGNMQT YLQSTTMRLE EWRIRRTDTE QWMHHRQLPP 
421:	ELRQAVRKYD QYKWLATRGV DEEALLISLP LDLRRDIKRH LCFDLVRRVP LFDQMDERML 
481:	DAICERLKPA LCTEGTFLVR EGDPVNEMLF IIRGHLDSYT TNGGRTGFFN SCLIGPGDFC 
541:	GEELLTWALD PRPVVILPSS TRTVKAICEV EAFALKAEDL QFVASQFRRL HTKQLRHKFR 
601:	FYSHQWRTWA ACFIQAAWRR HRKRKYKTEL RAKEEFHYRF EAATARLAVN GGKYTRSGSD 
661:	SGMMSSIQKP VEPDFSSE

Cross database links:

External Searches:

Analyze: