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Accession Number: | Q13563 |
Protein Name: | PKD2 |
Length: | 968 |
Molecular Weight: | 109691.00 |
Species: | Homo sapiens (Human) [9606] |
Number of TMSs: | 8 |
Location1 / Topology2 / Orientation3: | Membrane1 / Multi-pass membrane protein2 |
Substrate | calcium(2+), monoatomic monocation, sodium(1+), potassium(1+), tetraethylammonium |
Cross database links:
RefSeq: | NP_000288.1 |
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Entrez Gene ID: | 5311 |
Pfam: | PF08016 |
OMIM: |
173900 phenotype 173910 gene+phenotype |
KEGG: | hsa:5311 |
Gene Ontology
GO:0015629
C:actin cytoskeleton
GO:0005783
C:endoplasmic reticulum
GO:0016021
C:integral to membrane
GO:0005932
C:microtubule basal body
GO:0005886
C:plasma membrane
GO:0005509
F:calcium ion binding
GO:0008092
F:cytoskeletal protein binding
GO:0008022
F:protein C-terminus binding
GO:0005247
F:voltage-gated chloride channel activity
GO:0005248
F:voltage-gated sodium channel activity
GO:0007160
P:cell-matrix adhesion
GO:0009887
P:organ morphogenesis
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References (19)[1] “PKD2, a gene for polycystic kidney disease that encodes an integral membrane protein.” Mochizuki T.et.al. 8650545 [2] “Characterization of the exon structure of the polycystic kidney disease 2 gene (PKD2).” Hayashi T.et.al. 9286709 [3] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).” The MGC Project Teamet.al. 15489334 [4] “A gene similar to PKD1 maps to chromosome 4q22: a candidate gene for PKD2.” Schneider M.C.et.al. 8954772 [5] “In vivo interaction of the adapter protein CD2-associated protein with the type 2 polycystic kidney disease protein, polycystin-2.” Lehtonen S.et.al. 10913159 [6] “The polycystic kidney disease protein PKD2 interacts with Hax-1, a protein associated with the actin cytoskeleton.” Gallagher A.R.et.al. 10760273 [7] “Polycystin channels and kidney disease.” Stayner C.et.al. 11698076 [8] “Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.” Olsen J.V.et.al. 17081983 [9] “Global proteomic profiling of phosphopeptides using electron transfer dissociation tandem mass spectrometry.” Molina H.et.al. 17287340 [10] “Domain mapping of the polycystin-2 C-terminal tail using de novo molecular modeling and biophysical analysis.” Celic A.et.al. 18694932 [11] “A spectrum of mutations in the second gene for autosomal dominant polycystic kidney disease (PKD2).” Veldhuisen B.et.al. 9326320 [12] “Aberrant splicing in the PKD2 gene as a cause of polycystic kidney disease.” Reynolds D.M.et.al. 10541293 [13] “Seven novel mutations of the PKD2 gene in families with autosomal dominant polycystic kidney disease.” Torra R.et.al. 10411676 [14] “Mutations of PKD1 in ADPKD2 cysts suggest a pathogenic effect of trans-heterozygous mutations.” Watnick T.J.et.al. 10835625 [15] “Four novel mutations of the PKD2 gene in Czech families with autosomal dominant polycystic kidney disease.” Reiterova J.et.al. 11968093 | |
Structure: | |
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External Searches:
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Analyze:
Predict TMSs (Predict number of transmembrane segments) | ||||
FASTA formatted sequence |
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1: MVNSSRVQPQ QPGDAKRPPA PRAPDPGRLM AGCAAVGASL AAPGGLCEQR GLEIEMQRIR 61: QAAARDPPAG AAASPSPPLS SCSRQAWSRD NPGFEAEEEE EEVEGEEGGM VVEMDVEWRP 121: GSRRSAASSA VSSVGARSRG LGGYHGAGHP SGRRRRREDQ GPPCPSPVGG GDPLHRHLPL 181: EGQPPRVAWA ERLVRGLRGL WGTRLMEESS TNREKYLKSV LRELVTYLLF LIVLCILTYG 241: MMSSNVYYYT RMMSQLFLDT PVSKTEKTNF KTLSSMEDFW KFTEGSLLDG LYWKMQPSNQ 301: TEADNRSFIF YENLLLGVPR IRQLRVRNGS CSIPQDLRDE IKECYDVYSV SSEDRAPFGP 361: RNGTAWIYTS EKDLNGSSHW GIIATYSGAG YYLDLSRTRE ETAAQVASLK KNVWLDRGTR 421: ATFIDFSVYN ANINLFCVVR LLVEFPATGG VIPSWQFQPL KLIRYVTTFD FFLAACEIIF 481: CFFIFYYVVE EILEIRIHKL HYFRSFWNCL DVVIVVLSVV AIGINIYRTS NVEVLLQFLE 541: DQNTFPNFEH LAYWQIQFNN IAAVTVFFVW IKLFKFINFN RTMSQLSTTM SRCAKDLFGF 601: AIMFFIIFLA YAQLAYLVFG TQVDDFSTFQ ECIFTQFRII LGDINFAEIE EANRVLGPIY 661: FTTFVFFMFF ILLNMFLAII NDTYSEVKSD LAQQKAEMEL SDLIRKGYHK ALVKLKLKKN 721: TVDDISESLR QGGGKLNFDE LRQDLKGKGH TDAEIEAIFT KYDQDGDQEL TEHEHQQMRD 781: DLEKEREDLD LDHSSLPRPM SSRSFPRSLD DSEEDDDEDS GHSSRRRGSI SSGVSYEEFQ 841: VLVRRVDRME HSIGSIVSKI DAVIVKLEIM ERAKLKRREV LGRLLDGVAE DERLGRDSEI 901: HREQMERLVR EELERWESDD AASQISHGLG TPVGLNGQPR PRSSRPSSSQ STEGMEGAGG 961: NGSSNVHV