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| Accession Number: | Q9YS30 |
| Protein Name: | Polyprotein |
| Length: | 3898 |
| Molecular Weight: | 437638.00 |
| Species: | Classical swine fever virus [11096] |
| Number of TMSs: | 8 |
| Substrate | ion |
Cross database links:
| Pfam: | PF11889 PF07652 PF00271 PF05550 PF12387 PF05578 PF00998 |
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Gene Ontology
GO:0033644
C:host cell membrane
GO:0016021
C:integral to membrane
GO:0005524
F:ATP binding
GO:0008026
F:ATP-dependent helicase activity
GO:0004197
F:cysteine-type endopeptidase activity
GO:0033897
F:ribonuclease T2 activity
GO:0003723
F:RNA binding
GO:0003968
F:RNA-directed RNA polymerase activity
GO:0004252
F:serine-type endopeptidase activity
GO:0070008
F:serine-type exopeptidase activity
GO:0044419
P:interspecies interaction between organisms
GO:0006508
P:proteolysis
GO:0006351
P:transcription, DNA-dependent
GO:0019079
P:viral genome replication
GO:0019082
P:viral protein processing
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External Searches:
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Analyze:
| Predict TMSs (Predict number of transmembrane segments) | ||||
| FASTA formatted sequence |
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1: MELNHFELLY RTNKQKPMGV EEPVYDATGR PLFGDPSEVH PQSTLKLPHD RGRGNIKTTL 61: NNLPRKGDCR SGNHLGPVSG IYVKPGPVFY QDYMGPVYHR APLEFFNETQ FCEVTKRIGR 121: VTGSDGKLYH IYVCIDGCIL LKLAKRGEPR TLKWIRNFTD CPLWVTSCSD DGASGSKEKK 181: PDRINKGKLK IAPKEHEKDS RTKPPDATIV VEGVKYQVKK KGKVKGKNTQ DGLYHNKNKP 241: PESRKKLEKA LLAWAVITIM LYQPVEAENI TQWNLSDNGT NGIQHAMYLR GVSRSLHGIW 301: PEKICKGVPT YLATDTELKE IQGMMDASEG TNYTCCKLQR HEWNKHGWCN WYNIDPWIQL 361: MNRTQANLAE GPPAKECAVT CRYDKDADIN VVTQARNRPT TLTGCKKGKN FSFVGTIIEG 421: PCNFNVSVED ILYGDHECGS LLQDTALYLV DGMTNTIENA RQGAARVTSW LGRQLSTAGK 481: RLEGRSKTWF GAYALSPYCN VTSKIGYIWY TNNCTPACLP KNTKIIGPGK FDTNAEDGKI 541: LHEMGGHLSE FLLLSLVVLS DFAPETASAL YLILHYVIPQ SYEEPEGCDT NQLNLTVELR 601: TEDVIPSSVW NVGKYVCVRP DWWPYETKVA LLFEEAGQVV KLALRALRDL TRVWNSASTT 661: AFLICLIKVL RGQIVQGVIW LLLVTGAQGR LACKEDYRYA ISSTNEIGLL GAGGLTTTWK 721: EYSHDLQLND GTVKAICVAG SFKVTALNVV SRRYLASLHK GALLTSVTFE LLFDGTNPST 781: EEMGDDFGFG LCPFDTSPVV KGKYNTTLLN GSAFYLVCPI GWTGVIECTA VSPTTLRTEV 841: VKTFRREKPF PHRMDCVTTT VENEDLFYCK LGGNWTCVKG EPVVYTGGQV KQCKWCGFDF 901: NEPDGLPHYP IGKCILANET GYRIVDSTDC NRDGVVISAE GSHECLVGNT TVKVHASDER 961: LGPMPCRPKE IVSSAGPVRK TSCTFNYAKT LKNKYYEPRD SYFQQYMLKG EYQYWFDLDV 1021: TDRHSDYFAE FVVLVVVALL GGRYVLWLIV TYIVLTEQLA AGLPLGQGEV VLIGNLITHT 1081: DIEVVVYFLL LYLVMRDEPI KKWILLLFHA MTNNPVKTIT VALLMVSGVA KGGKIDGGWQ 1141: RLPETSFDIQ LALTVIVVAV MLLAKRDPTT VPLVITVATL RTAKMTNGLS TDIAIATVST 1201: ALLTWTYISD YYRYKTWLQY LISTVTGIFL IRVLKGIGEL DLHTPTLPCY RPLFFILVYL 1261: ISTAVVTRWN LDIAGLLLQC VPTLLMVFTM WADILTLILI LPTYELTKLY YLKEVKIGAE 1321: RGWLWKTNFK RVNDIYEVDQ AGEGVYLFPS KQKTSSITGT MLPLIKAILI SCISNKWQFI 1381: YLLYLIFEVS YYLHKKIIDE IAGGTNFISR LVAALIEANW AFDNEEVRGL KKFFLLSSRV 1441: KELIIKHKVR NEVMVHWFGD EEVYGMPKLV GLVKAATLSK NKHCILCTVC EDREWKGETC 1501: PKCGRFGPPM TCGMTLADFE EKHYKRIFFR EDQSEGPVRE EYAGYLQYRA RGQLFLRNLP 1561: VLATKVKMLL VGNLGTEVGD LEHLGWVLRG PAVCKKVTEH EKCTTSIMDK LTAFFGVMPR 1621: GTTPRAPVRF PTSLLKIRRG LETGWAYTHQ GGISSVDHVT CGKDLLVCDT MGRTRVVCQS 1681: NNKMTDESEY GVKTDSGCPE GARCYVFNPE AVNISGTKGA MVHLQKTGGE FTCVTASGTP 1741: AFFDLKNLKG WSGLPIFEAS SGRVVGRVKV GKNEDSKPTK LMSGIQTVSK STTDLTEMVK 1801: KITTMNRGEF RQITLATGAG KTTELPRSVI EEIGRHKRVL VLIPLRAAAE SVYQYMRQKH 1861: PSIAFNLRIG EMKEGDMATG ITYASYGYFC QMPQPKLRAA MVEYSFIFLD EYHCATPEQL 1921: AIMGKIHRFS ENLRVVAMTA TPAGTVTTTG QKHPIEEFIA PEVMKGEDLG SEYLDIAGLK 1981: IPVEEMKSNM LVFVPTRNMA VETAKKLKAK GYNSGYYYSG EDPSNLRVVT SQSPYVVVAT 2041: NATESGVTLP DLDVVVDTGL KCEKRIRLSS KMPFIVTGLK RMAVTIGEQA QRRGRVGRVK 2101: PGRYYRSQET PVGSKDYHYD LLQAQRYGIE DGINITKSFR EMNYDWSLYE EDSLMITQLE 2161: ILNNLLISEE LPMAVKNIMA RTDHPEPIQL AYNSYETQVP VLFPKIRNGE VTDSYDNYTF 2221: LNARKLGDDV PPYVYATEDE DLAVELLGSD WPDPGNQGTV EAGRALKQVV GLSTAENALL 2281: VALFGYVGYQ ALSKRHIPVV TDIYSIEDHR LEDTTHLQYA PNAIKTEGKE TELKELAQGD 2341: VQRCVEAMTN YAREGIQFMK SQALKVKETP TYKETMDTVT DYVKKFMEAL KDSKEDIMKY 2401: GLWGTHTALY KSISARLGSE TAFATLVVKW LAFGGESIAD HVKQAATDLV VYYIINRPQF 2461: PGDTETQQEG RKFVASLLVS ALATYTYKSW NYNNLSKIVE PALATLPYAA TALKLFAPTR 2521: LESVVILSTA IYKTYLSIRR GKSDGLLGTG VSAAMEIMSQ NPVSVGIAVM LGVGAVAAHN 2581: AIEASEQKRT LLMKVFVKNF LDQAATDELV KESPEKIIMA LFEAVQTVGN PLRLVYHLYG 2641: VFYKGWEAKE LAQRTAGRNL FTLIMFEAVE LLGVDSEGKI RQLSSNYILE LLYKFRDSIK 2701: SSVREMAISW APAPFSCDWT PTDNRIGLPQ DNFLQVETKC PCGYKMKAVK NCAGELRLLE 2761: EEGSFLCRNK FGRGSRNYKV TKYYDDNLSE IKPVIKMEGH VELYYKGATI KLDFNNSKTI 2821: LATDKWEVDH STLVRVLKRH TGAGYNGAYL GEKPNHKHLI ERDCATITKD KVCFLKMKRG 2881: CAFTYDLSLH NLTRLIELVH KNNLEDKEIP AVTVTTWLAY TFVNEDIGTI RPAFGEKVTP 2941: EMQEEITLQP AVVVDTTDVT VTVVGEAPTM TTGETPTAFT SSGSDPKGQQ VLKLGVGEGQ 3001: YPGTNPQRAS LHEAIQGADE RPSVLILGSD KATSNRVKTA KNVKVYRGRD PLEVRDMMRR 3061: GKILVIALSK VDNALLKFVD YKGTFLTRET LEALSLGRPK KKDITKAEAQ WLLCLEDQTE 3121: ELPDWFAAGE PIFLEANIKH DRYHLVGDIA TIKEKAKQLG ATDSTKISKE VGAKVYSMKL 3181: SNWVMQEENK QGNLTPLFEE LLQQCPPGGQ NKTAHMVSAY QLAQGNWMPT SCHVFMGTIS 3241: ARRTKTHPYE AYVKLRELIE EHKMKTLCPG SSLGKHNEWI IGKIKYQGNL RTKHMLNPGK 3301: VAEQLCREGH RHNVYNKTIG SVMTATGIRL EKLPVVRAQT DTTNFHQAIR DKIDKEENLQ 3361: TPGLHKKLME VFNALKRPEL ESSYDAVEWE ELERGINRKG AAGFFERKNI GEILDSEKNK 3421: VEEIIDNLKK GRNIKYCETA IPKNEKRDVN DDWTAGDFVD EKKPRVIQYP EAKTRLAITK 3481: VMYKWVKQKP VVIPGYEGKT PLFQIFDKVK REWDQFQNPV AVSFDTKAWD TQVTTKDLEL 3541: IMDIQKYYFK KKWHKFIDTL TMHMTEVPVI CADGEVYIRK GQRGSGQPDT SAGNSMLNVL 3601: TMVYAFCEAT GVPYKSFDRV AKIHVCGDDG LLITERALGE KFASKGVQIL YEAGKPQKIT 3661: EGDKMKVAYQ FDDIEFCSHT PIQVRWSDNT SSYMPGRNTT TILAKMATRL DSSGERGTIA 3721: CEKAVAFSFL LMYSWNPLIR RICLLVLSTE LQVKPGKSTT YYYEGDPISA YKEVIGHNLL 3781: DLKRTSFEKL AKLNLSMSVL GAWTRHTSKR LLQDCVNMGV KEGNWLVNAD RLVSSKTGNR 3841: YIPGEGHTLQ GRHYEELVLA RKQINNFQGA DRYNLGPIVD MVLRRLRVMM MTLIGRGV