TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


1.A.97.1.1
The E5 viroporin protein of 83 aas and 3 TMSs (Wetherill et al. 2012). It forms hexameric channels with TMS2 lining the pore, creating a water column through which ions and small molecules, including H+, can pass fairly non-specifically (Mahato and Fischer 2016). A "snapshot" structure of the putative open pore of the protein bundle suggested the proposed low channel selectivity (Mahato and Fischer 2016). The protein is involved in signalling and protein trafficking. Its gene may be an oncogene (Scott and Griffin 2015).The protein also interacts with the fourth TMS of the 16 kDa c subunit of the human vacuolar H+-ATPase (Mahato and Fischer 2018).

Accession Number:P06927
Protein Name:Probable protein E5
Length:83
Molecular Weight:9402.00
Species:Human papillomavirus type 16 [333760]
Number of TMSs:3
Location1 / Topology2 / Orientation3: Host membrane1 / Multi-pass membrane protein2
Substrate ion

Cross database links:

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	MTNLDTASTT LLACFLLCFC VLLCVCLLIR PLLLSVSTYT SLIILVLLLW ITAASAFRCF 
61:	IVYIIFVYIP LFLIHTHARF LIT