TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
1.G.13.1.1 | Membrane fusion protein p14 (fusion-associated small transmembrane (Fast) protein) of 125 aas and 1 TMS of reptilian reovirus has an approximately 38-residue myristoylated N-terminal ectodomain containing a moderately apolar N-proximal region, termed the hydrophobic patch. The structure of the 38 aa non-myristoylated N-terminal transmembrane/ectodomain has been determined by NMR (2XL0_A) (Corcoran et al. 2004). Mediates lipid mixing in a liposome fusion assay The soluble nonmyristoylated p14 ectodomain peptide consists of an N-proximal extended loop flanked by two proline hinges. The remaining two-thirds of the ectodomain is disordered, consistent with predictions based on CD spectra of the myristoylated peptide. The myristoylated p14 ectodomain peptide mediates lipid mixing in a liposome fusion assay. Structural plasticity, environmentally induced conformational changes, and kinked structures predicted for the p14 ectodomain and hydrophobic patch are all features associated with fusion peptides (Corcoran et al. 2004). It lacks a cleavable signal sequence and uses an internal reverse signal-anchor sequence to direct membrane insertion and protein topology. This topology results in the unexpected, cotranslational translocation of the essential myristylated N-terminal domain of p14 across the cell membrane (Corcoran and Duncan 2004). | Viruses |
Orthornavirae, Duplornaviricota | p14 of the reptilian orth-reovirus |
1.G.13.1.2 | Small non-structured protein, p13 of 113 aas and 1 (or 2) TMSs. | Viruses |
Orthornavirae, Duplornaviricota | p13 of Broome virus |
1.G.13.1.3 | P14 protein of 119 aas and 1 TMS. | Viruses |
Orthornavirae, Duplornaviricota | P14 of a reptilian orthoreovirus |
1.G.13.2.1 | The p15 fusion-associated small transmembrane (FAST) protein is a nonstructural viral protein that induces cell-cell fusion and syncytium formation (Top et al. 2012). The small, myristoylated N-terminal ectodomain of p15 lacks any of the defining features of a typical viral fusion protein. NMR and CD spectroscopy indicated that this small fusion module (residues 68 - 87) comprises a left-handed polyproline type II (PPII) helix flanked by small, unstructured N- and C-termini (PDB# 2MNS_A). Individual prolines in the 6-residue proline-rich motif are tolerant to alanine substitutions, but multiple substitutions that disrupt the PPII helix eliminate cell-cell fusion activity. A synthetic p15 ectodomain peptide induces lipid mixing between liposomes. Lipid mixing, liposome aggregation, and stable peptide-membrane interactions are all dependent on both the N-terminal myristate and the presence of the PPII helix. A model for the mechanism of action of this viral fusion peptide, whereby the N-terminal myristate mediates initial, reversible peptide-membrane binding that is stabilized by subsequent amino acid-membrane interactions. These interactions induce a biphasic membrane fusion reaction, with peptide-induced liposome aggregation representing a distinct, rate-limiting event that precedes membrane merger. The PPII helix may function to force solvent exposure of hydrophobic amino acid side chains in the regions flanking the helix to promote membrane binding, apposition, and fusion (Top et al. 2012). A fusion-inducing lipid packing sensor (FLiPS) in the cytosolic endodomain in the p15 fusion-associated small transmembrane (FAST) protein is essential for pore formation during cell-cell fusion and syncytiogenesis (Read et al. 2015). The Myristoylated Polyproline Type Ii Helix Protein of 22 aas (residues 68 - 87 in P15) functions as a fusion peptide during cell-cell membrane fusion. The 3-d structure is known (PDB# 2LKW). | Viruses |
Orthornavirae, Duplornaviricota | Membrane fusion protein p15 of Baboon orthoreovirus |