TCDB is operated by the Saier Lab Bioinformatics Group
TCIDNameDomainKingdom/PhylumProtein(s)
1.M.2.1.1









Enterobacterial phage T1 U-spanin, gp11, of 133 aas (Summer et al. 2007). It disrupts the host outer membrane and participates in cell lysis during virus exit. The spanin complex usually conducts the final step in host lysis by disrupting the outer membrane after holin and endolysin action have permeabilized the inner membrane and degraded the host peptidoglycans. Host outer membrane disruption is possibly due to local fusion between the inner and outer membrane performed by the spanin (Young 2014; Fernandes and São-José 2018). This spanin has been used for phage-based antimicrobial development (Yamashita et al. 2024).

gp11 mediates lysis in the absence of holin and endolysin function when the peptidoglycan density is depleted by starvation for murein precursors. Thus, the peptidoglycan is a negative regulator of gp11 function, supporting a model in which gp11 acts by fusing the inner and outer membranes, a mode of action analogous to but mechanistically distinct from that proposed for two-component spanin systems (Kongari et al. 2018).

Viruses
Caudovirales
U-spanin of phage T1 (Q6XQ97)
1.M.2.1.2









Uncharacterized spanin of 188 aas and 2 TMSs, N- and C-terminal.

Viruses
Heunggongvirae, Uroviricota
UP of Pantoea phage LIMEzero
1.M.2.1.3









Uncharacterized spanin of 134 aas and 2 TMSs, N- and C-terminal.

Viruses
Heunggongvirae, Uroviricota
UP of Escherichia virus KP26
1.M.2.1.4









Uncharacterized putative spanin of 134 aas and 2 TMSs, N- and C-terminal.

Viruses
Heunggongvirae, Uroviricota
Spanin of Proteus phage PM16
1.M.2.1.5









Uncharacterized putative spanin of 132 aas and 2 TMSs, N- and C-terminal.

Viruses
Heunggongvirae, Uroviricota
UP of Marinomonas phage CB5A
1.M.2.2.1









Uncharacterized putative spanin of 161 aas and 2 or 3 TMSs with one N-terminal and one or two C-terminnal.

Viruses
Heunggongvirae, Uroviricota
UP of Colwellia phage 9A
1.M.2.2.2









Uncharacterized putative spanin of 141 aas and 2 TMSs, N- and C-terminal.

Viruses
Heunggongvirae, Uroviricota
UP of Pseudoalteromonas phage PH357
1.M.2.2.3









Uncharacterized putative spanin of 135 aas and 1 N-terminal TMS.  May be incomplete.

Bacteria
Actinomycetota
UP of Kibdelosporangium sp. MJ126-NF4
1.M.2.3.1









Uncharacterized putative spanin of 117 aas and 2 TMSs, N- and C-terminal.

Bacteria
Pseudomonadota
UP of Salinihabitans flavidus
1.M.2.3.2









Uncharacterized putative spanin of 109 aas and 2 TMSs, N- and C-terminal.

Bacteria
Pseudomonadota
UP of Rhodovulum sulfidophilum
1.M.2.3.3









Uncharacterized putative spanin of 124 aas and 2 TMSs, N- and C-terminal.

Bacteria
Pseudomonadota
UP of Mameliella alba
1.M.2.3.4









Uncharacterized putative spanin of 112 aas and 2 TMSs, N- and C-terminal.

Viruses
Heunggongvirae, Uroviricota
UP of Roseobacter virus SIO1